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NECEvent2014_3_4_Clostridium_sporogenes-rel_29_5

NECEvent2014_3_4_Clostridium_botulinum_29_5
In projects: NECEvent2014_3_4

Consensus taxonomy: Clostridium botulinum  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Description

Related to C. botulinum and C. sporogenes

Displaying items 51-100 of 1183 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_4_scaffold_2771 173_002_scaffold_2771
Species: Clostridium botulinum (100%)
2 1081 bp 26.09 3.33 78.82
NECEvent2014_3_4_scaffold_2776 173_002_scaffold_2776
Species: Clostridium sporogenes (100%)
1 1078 bp 27.09 3.34 73.75
NECEvent2014_3_4_scaffold_1582 173_002_scaffold_1582
Species: Clostridium botulinum (60%)
5 2289 bp 25.56 3.34 76.02
NECEvent2014_3_4_scaffold_2380 173_002_scaffold_2380
Species: Clostridium sporogenes (66.67%)
3 1348 bp 26.04 3.34 92.14
NECEvent2014_3_4_scaffold_2235 173_002_scaffold_2235
Species: Clostridium sporogenes (100%)
1 1477 bp 21.67 3.35 61.75
NECEvent2014_3_4_scaffold_2779 173_002_scaffold_2779
Species: Clostridium botulinum (100%)
3 1076 bp 22.40 3.35 94.24
NECEvent2014_3_4_scaffold_2134 173_002_scaffold_2134
Species: Clostridium botulinum (100%)
2 1568 bp 24.68 3.35 74.43
NECEvent2014_3_4_scaffold_2787 173_002_scaffold_2787
Species: Clostridium botulinum (100%)
1 1073 bp 29.45 3.36 62.07
NECEvent2014_3_4_scaffold_2789 173_002_scaffold_2789
Species: Clostridium botulinum (50%)
2 1071 bp 24.09 3.36 72.27
NECEvent2014_3_4_scaffold_2240 173_002_scaffold_2240
Species: Clostridium botulinum (100%)
2 1470 bp 26.53 3.37 59.18
NECEvent2014_3_4_scaffold_2794 173_002_scaffold_2794
Species: Clostridium sporogenes (100%)
2 1069 bp 26.38 3.37 58.37
NECEvent2014_3_4_scaffold_2201 173_002_scaffold_2201
Species: Clostridium sporogenes (50%)
2 1510 bp 25.17 3.38 90.40
NECEvent2014_3_4_scaffold_2523 173_002_scaffold_2523
Species: Clostridium sporogenes (50%)
2 1241 bp 31.91 3.38 94.04
NECEvent2014_3_4_scaffold_2405 173_002_scaffold_2405
Species: Clostridium sporogenes (66.67%)
3 1324 bp 24.09 3.40 91.09
NECEvent2014_3_4_scaffold_1945 173_002_scaffold_1945
Species: Clostridium sporogenes (66.67%)
3 1763 bp 25.75 3.40 98.70
NECEvent2014_3_4_scaffold_2809 173_002_scaffold_2809
Species: Clostridium sporogenes (100%)
1 1060 bp 25.85 3.40 79.25
NECEvent2014_3_4_scaffold_2811 173_002_scaffold_2811
Species: Clostridium sporogenes (100%)
1 1060 bp 25.28 3.40 99.91
NECEvent2014_3_4_scaffold_2542 173_002_scaffold_2542
Species: Clostridium botulinum (100%)
1 1228 bp 22.07 3.42 96.74
NECEvent2014_3_4_scaffold_2310 173_002_scaffold_2310
Species: Clostridium botulinum (66.67%)
3 1405 bp 25.77 3.42 89.89
NECEvent2014_3_4_scaffold_1749 173_002_scaffold_1749
Species: Clostridium sporogenes (100%)
3 2013 bp 23.99 3.43 94.78
NECEvent2014_3_4_scaffold_2428 173_002_scaffold_2428
Species: Clostridium sporogenes (100%)
1 1308 bp 28.44 3.44 91.05
NECEvent2014_3_4_scaffold_1161 173_002_scaffold_1161
Species: Clostridium botulinum (66.67%)
3 3275 bp 24.40 3.44 95.91
NECEvent2014_3_4_scaffold_1821 173_002_scaffold_1821
Species: Clostridium botulinum (66.67%)
3 1919 bp 27.93 3.44 83.32
NECEvent2014_3_4_scaffold_2489 173_002_scaffold_2489
Species: Clostridium botulinum (66.67%)
3 1260 bp 28.97 3.45 91.43
NECEvent2014_3_4_scaffold_1790 173_002_scaffold_1790
Species: Clostridium botulinum (66.67%)
3 1958 bp 25.79 3.45 88.41
NECEvent2014_3_4_scaffold_2333 173_002_scaffold_2333
Species: Clostridium botulinum (50%)
2 1392 bp 30.39 3.45 108.19
NECEvent2014_3_4_scaffold_2436 173_002_scaffold_2436
Species: Clostridium botulinum (100%)
1 1300 bp 26.31 3.46 99.92
NECEvent2014_3_4_scaffold_1066 173_002_scaffold_1066
Species: Clostridium sporogenes (100%)
2 3641 bp 29.52 3.46 86.19
NECEvent2014_3_4_scaffold_2694 173_002_scaffold_2694
Species: Clostridium sporogenes (100%)
2 1124 bp 24.64 3.47 76.60
NECEvent2014_3_4_scaffold_1534 173_002_scaffold_1534
Species: Clostridium botulinum (75%)
4 2369 bp 25.28 3.48 88.52
NECEvent2014_3_4_scaffold_2101 173_002_scaffold_2101
Species: Clostridium sporogenes (100%)
2 1594 bp 25.22 3.48 97.87
NECEvent2014_3_4_scaffold_1884 173_002_scaffold_1884
Species: Clostridium botulinum (50%)
2 1851 bp 26.96 3.48 95.95
NECEvent2014_3_4_scaffold_1985 173_002_scaffold_1985
Species: Clostridium sporogenes (66.67%)
3 1720 bp 27.79 3.49 66.98
NECEvent2014_3_4_scaffold_2584 173_002_scaffold_2584
Species: Clostridium sporogenes (50%)
2 1205 bp 27.47 3.49 85.15
NECEvent2014_3_4_scaffold_2397 173_002_scaffold_2397
Species: Clostridium sporogenes (100%)
2 1333 bp 29.03 3.49 78.99
NECEvent2014_3_4_scaffold_2258 173_002_scaffold_2258
Species: Clostridium sporogenes (100%)
3 1459 bp 27.90 3.50 91.09
NECEvent2014_3_4_scaffold_1747 173_002_scaffold_1747
Species: Clostridium botulinum (66.67%)
3 2017 bp 26.28 3.50 97.57
NECEvent2014_3_4_scaffold_1567 173_002_scaffold_1567
Species: Clostridium botulinum (100%)
1 2312 bp 28.85 3.50 99.52
NECEvent2014_3_4_scaffold_2860 173_002_scaffold_2860
Species: Clostridium botulinum (50%)
2 1028 bp 25.00 3.50 99.22
NECEvent2014_3_4_scaffold_1381 173_002_scaffold_1381
Species: Clostridium botulinum (100%)
3 2649 bp 28.01 3.51 77.24
NECEvent2014_3_4_scaffold_2718 173_002_scaffold_2718
Species: Clostridium botulinum (66.67%)
3 1112 bp 24.55 3.51 95.23
NECEvent2014_3_4_scaffold_2218 173_002_scaffold_2218
Species: Clostridium botulinum (100%)
2 1495 bp 25.08 3.51 96.32
NECEvent2014_3_4_scaffold_2455 173_002_scaffold_2455
Species: Clostridium botulinum (100%)
2 1278 bp 30.05 3.52 99.06
NECEvent2014_3_4_scaffold_1603 173_002_scaffold_1603
Species: Clostridium botulinum (100%)
1 2257 bp 30.48 3.52 89.99
NECEvent2014_3_4_scaffold_2415 173_002_scaffold_2415
Species: Clostridium botulinum (100%)
1 1316 bp 24.09 3.53 73.18
NECEvent2014_3_4_scaffold_2181 173_002_scaffold_2181
Species: Clostridium botulinum (100%)
1 1524 bp 28.02 3.54 93.70
NECEvent2014_3_4_scaffold_2465 173_002_scaffold_2465
Species: Clostridium sporogenes (100%)
1 1271 bp 21.56 3.54 67.03
NECEvent2014_3_4_scaffold_2363 173_002_scaffold_2363
Species: Clostridium botulinum (100%)
2 1356 bp 26.47 3.54 62.17
NECEvent2014_3_4_scaffold_2375 173_002_scaffold_2375
Species: Clostridium sporogenes (100%)
1 1352 bp 26.85 3.55 70.12
NECEvent2014_3_4_scaffold_2748 173_002_scaffold_2748
Species: Clostridium sporogenes (50%)
2 1095 bp 26.03 3.56 69.32
Displaying items 51-100 of 1183 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.