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NECEvent2014_3_4_Clostridium_sporogenes-rel_29_5

NECEvent2014_3_4_Clostridium_botulinum_29_5
In projects: NECEvent2014_3_4

Consensus taxonomy: Clostridium botulinum  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Description

Related to C. botulinum and C. sporogenes

Displaying items 151-200 of 1183 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_4_scaffold_2265 173_002_scaffold_2265
Species: Thermoanaerobacterium aotearoense (100%)
1 1449 bp 26.09 3.73 82.82
NECEvent2014_3_4_scaffold_1508 173_002_scaffold_1508
Species: Clostridium botulinum (66.67%)
3 2416 bp 30.75 3.73 95.24
NECEvent2014_3_4_scaffold_1533 173_002_scaffold_1533
Species: Clostridium botulinum (50%)
2 2371 bp 29.02 3.73 87.18
NECEvent2014_3_4_scaffold_2579 173_002_scaffold_2579
Species: Clostridium botulinum (100%)
1 1208 bp 27.24 3.73 99.83
NECEvent2014_3_4_scaffold_2086 173_002_scaffold_2086
Species: Clostridium botulinum (66.67%)
3 1610 bp 26.40 3.73 83.85
NECEvent2014_3_4_scaffold_2088 173_002_scaffold_2088
Species: Clostridium botulinum (100%)
2 1608 bp 24.44 3.73 82.65
NECEvent2014_3_4_scaffold_2180 173_002_scaffold_2180
Species: Clostridium sporogenes (66.67%)
3 1524 bp 25.07 3.74 90.35
NECEvent2014_3_4_scaffold_2313 173_002_scaffold_2313
Species: Clostridium botulinum (100%)
1 1403 bp 27.44 3.74 97.51
NECEvent2014_3_4_scaffold_2586 173_002_scaffold_2586
Species: Clostridium sporogenes (50%)
2 1203 bp 26.85 3.74 82.54
NECEvent2014_3_4_scaffold_2137 173_002_scaffold_2137
Species: Clostridium botulinum (100%)
1 1565 bp 23.90 3.74 79.36
NECEvent2014_3_4_scaffold_1383 173_002_scaffold_1383
Species: Clostridium botulinum (66.67%)
3 2642 bp 26.91 3.75 96.86
NECEvent2014_3_4_scaffold_2412 173_002_scaffold_2412
Species: Clostridium botulinum (100%)
2 1319 bp 25.78 3.75 98.71
NECEvent2014_3_4_scaffold_2186 173_002_scaffold_2186
Species: Clostridium botulinum (50%)
2 1520 bp 27.83 3.75 86.45
NECEvent2014_3_4_scaffold_2276 173_002_scaffold_2276
Species: Clostridium botulinum (100%)
1 1441 bp 27.00 3.75 66.20
NECEvent2014_3_4_scaffold_1892 173_002_scaffold_1892
Species: Clostridium botulinum (100%)
2 1835 bp 27.25 3.76 82.40
NECEvent2014_3_4_scaffold_2191 173_002_scaffold_2191
Species: Clostridium sporogenes (100%)
2 1516 bp 26.85 3.76 99.93
NECEvent2014_3_4_scaffold_2457 173_002_scaffold_2457
Species: Clostridium sporogenes (75%)
4 1276 bp 21.71 3.76 82.29
NECEvent2014_3_4_scaffold_2417 173_002_scaffold_2417
Species: Clostridium botulinum (100%)
3 1314 bp 25.72 3.77 87.90
NECEvent2014_3_4_scaffold_2712 173_002_scaffold_2712
Species: Clostridium sporogenes (66.67%)
3 1115 bp 25.29 3.77 75.87
NECEvent2014_3_4_scaffold_1211 173_002_scaffold_1211
Species: Clostridium sporogenes (66.67%)
3 3106 bp 25.72 3.77 93.79
NECEvent2014_3_4_scaffold_1502 173_002_scaffold_1502
Species: Clostridium sporogenes (100%)
2 2427 bp 26.04 3.77 93.08
NECEvent2014_3_4_scaffold_1993 173_002_scaffold_1993
Species: Clostridium sporogenes (100%)
2 1707 bp 30.35 3.78 100.18
NECEvent2014_3_4_scaffold_1720 173_002_scaffold_1720
Species: Clostridium botulinum (50%)
2 2057 bp 27.52 3.79 94.94
NECEvent2014_3_4_scaffold_1320 173_002_scaffold_1320
Species: Clostridium botulinum (100%)
2 2770 bp 29.17 3.79 86.64
NECEvent2014_3_4_scaffold_1675 173_002_scaffold_1675
Species: Clostridium sporogenes (50%)
2 2131 bp 27.97 3.80 82.50
NECEvent2014_3_4_scaffold_2731 173_002_scaffold_2731
Species: Clostridium botulinum (100%)
1 1104 bp 29.44 3.80 54.89
NECEvent2014_3_4_scaffold_2041 173_002_scaffold_2041
Species: Clostridium botulinum (50%)
2 1656 bp 26.21 3.80 53.62
NECEvent2014_3_4_scaffold_1352 173_002_scaffold_1352
Species: Clostridium sporogenes (66.67%)
3 2687 bp 25.94 3.80 97.69
NECEvent2014_3_4_scaffold_2162 173_002_scaffold_2162
Species: Clostridium sporogenes (100%)
1 1537 bp 30.12 3.81 72.22
NECEvent2014_3_4_scaffold_2214 173_002_scaffold_2214
Species: Clostridium botulinum (50%)
2 1498 bp 26.97 3.81 87.12
NECEvent2014_3_4_scaffold_1840 173_002_scaffold_1840
Species: Clostridium botulinum (100%)
2 1891 bp 28.40 3.81 88.05
NECEvent2014_3_4_scaffold_2127 173_002_scaffold_2127
Species: Clostridium sporogenes (100%)
1 1573 bp 26.38 3.81 80.48
NECEvent2014_3_4_scaffold_2017 173_002_scaffold_2017
Species: Clostridium botulinum (100%)
1 1688 bp 32.29 3.82 88.68
NECEvent2014_3_4_scaffold_2564 173_002_scaffold_2564
Species: Clostridium sporogenes (100%)
1 1217 bp 30.24 3.82 90.96
NECEvent2014_3_4_scaffold_929 173_002_scaffold_929
Species: Clostridium sporogenes (60%)
5 4229 bp 28.71 3.83 96.90
NECEvent2014_3_4_scaffold_2226 173_002_scaffold_2226
Species: Clostridium botulinum (100%)
3 1488 bp 29.84 3.83 81.25
NECEvent2014_3_4_scaffold_1983 173_002_scaffold_1983
Species: Clostridium sporogenes (75%)
4 1725 bp 26.61 3.83 89.22
NECEvent2014_3_4_scaffold_2755 173_002_scaffold_2755
Species: Clostridium sporogenes (100%)
2 1094 bp 23.22 3.84 66.91
NECEvent2014_3_4_scaffold_2504 173_002_scaffold_2504
Species: Clostridium sporogenes (100%)
2 1249 bp 27.14 3.84 88.87
NECEvent2014_3_4_scaffold_1795 173_002_scaffold_1795
Species: Clostridium sporogenes (100%)
1 1954 bp 29.22 3.84 93.35
NECEvent2014_3_4_scaffold_1796 173_002_scaffold_1796
Species: Clostridium sporogenes (100%)
1 1954 bp 24.56 3.84 61.72
NECEvent2014_3_4_scaffold_2311 173_002_scaffold_2311
Species: Clostridium botulinum (100%)
2 1405 bp 33.24 3.84 92.88
NECEvent2014_3_4_scaffold_2572 173_002_scaffold_2572
Species: Clostridium botulinum (100%)
2 1212 bp 25.66 3.84 68.56
NECEvent2014_3_4_scaffold_1862 173_002_scaffold_1862
Species: Clostridium sporogenes (66.67%)
3 1873 bp 26.59 3.84 91.14
NECEvent2014_3_4_scaffold_2685 173_002_scaffold_2685
Species: Clostridium botulinum (50%)
2 1130 bp 26.64 3.85 90.53
NECEvent2014_3_4_scaffold_1692 173_002_scaffold_1692
Species: Clostridium sporogenes (66.67%)
3 2106 bp 26.59 3.85 102.28
NECEvent2014_3_4_scaffold_1828 173_002_scaffold_1828
Species: Clostridium botulinum (50%)
2 1908 bp 28.51 3.85 84.59
NECEvent2014_3_4_scaffold_2885 173_002_scaffold_2885
Species: Clostridium sporogenes (100%)
1 1013 bp 29.52 3.85 99.80
NECEvent2014_3_4_scaffold_2408 173_002_scaffold_2408
Species: Clostridium sporogenes (50%)
2 1322 bp 25.42 3.86 92.36
NECEvent2014_3_4_scaffold_1207 173_002_scaffold_1207
Species: Clostridium sporogenes (66.67%)
3 3112 bp 28.28 3.86 87.63
Displaying items 151-200 of 1183 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.