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NECEvent2014_3_4_Clostridium_sporogenes-rel_29_5

NECEvent2014_3_4_Clostridium_botulinum_29_5
In projects: NECEvent2014_3_4

Consensus taxonomy: Clostridium botulinum  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Description

Related to C. botulinum and C. sporogenes

Displaying items 51-100 of 1183 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_4_scaffold_2019 173_002_scaffold_2019
Species: Clostridium botulinum (100%)
2 1683 bp 30.12 6.51 92.87
NECEvent2014_3_4_scaffold_2804 173_002_scaffold_2804
Species: Clostridium botulinum (100%)
1 1061 bp 25.35 6.50 99.81
NECEvent2014_3_4_scaffold_2392 173_002_scaffold_2392
Species: Clostridium botulinum (100%)
1 1338 bp 30.79 6.50 99.78
NECEvent2014_3_4_scaffold_1196 173_002_scaffold_1196
Species: Clostridium botulinum (60%)
5 3149 bp 30.23 6.48 95.46
NECEvent2014_3_4_scaffold_1928 173_002_scaffold_1928
Species: Clostridium botulinum (100%)
1 1787 bp 29.27 6.46 90.32
NECEvent2014_3_4_scaffold_2499 173_002_scaffold_2499
Species: Clostridium botulinum (100%)
1 1254 bp 30.30 6.46 100.00
NECEvent2014_3_4_scaffold_1697 173_002_scaffold_1697
Species: Clostridium botulinum (100%)
3 2093 bp 30.58 6.45 81.70
NECEvent2014_3_4_scaffold_2576 173_002_scaffold_2576
Species: Clostridium botulinum (100%)
1 1209 bp 31.02 6.45 62.53
NECEvent2014_3_4_scaffold_939 173_002_scaffold_939
Species: Clostridium botulinum (87.5%)
8 4193 bp 29.24 6.44 86.50
NECEvent2014_3_4_scaffold_2482 173_002_scaffold_2482
Species: Clostridium sporogenes (100%)
1 1262 bp 32.17 6.42 94.85
NECEvent2014_3_4_scaffold_978 173_002_scaffold_978
Species: Clostridium sporogenes (60%)
5 3995 bp 29.64 6.42 92.97
NECEvent2014_3_4_scaffold_1344 173_002_scaffold_1344
Species: Clostridium sporogenes (50%)
2 2712 bp 31.75 6.42 97.35
NECEvent2014_3_4_scaffold_2470 173_002_scaffold_2470
Species: Clostridium botulinum (66.67%)
3 1269 bp 34.04 6.38 97.64
NECEvent2014_3_4_scaffold_2356 173_002_scaffold_2356
Species: Clostridium botulinum (100%)
2 1365 bp 29.45 6.37 97.58
NECEvent2014_3_4_scaffold_1809 173_002_scaffold_1809
Species: Clostridium botulinum (75%)
4 1942 bp 35.27 6.33 90.22
NECEvent2014_3_4_scaffold_2791 173_002_scaffold_2791
Species: Clostridium sporogenes (50%)
2 1070 bp 30.47 6.31 81.59
NECEvent2014_3_4_scaffold_1257 173_002_scaffold_1257
Species: Clostridium botulinum (66.67%)
3 2948 bp 30.80 6.31 81.00
NECEvent2014_3_4_scaffold_2603 173_002_scaffold_2603
Species: Clostridium sporogenes (100%)
1 1188 bp 29.88 6.31 86.36
NECEvent2014_3_4_scaffold_642 173_002_scaffold_642
Species: Clostridium botulinum (57.14%)
7 6885 bp 31.56 6.30 93.77
NECEvent2014_3_4_scaffold_916 173_002_scaffold_916
Genus: Clostridium (100%)
9 4286 bp 31.52 6.30 87.63
NECEvent2014_3_4_scaffold_1696 173_002_scaffold_1696
Genus: Clostridium (60%)
5 2094 bp 34.24 6.30 84.77
NECEvent2014_3_4_scaffold_2228 173_002_scaffold_2228
Species: Clostridium botulinum (50%)
2 1486 bp 26.85 6.26 93.07
NECEvent2014_3_4_scaffold_1240 173_002_scaffold_1240
Species: Clostridium sporogenes (100%)
2 3023 bp 29.34 6.25 84.75
NECEvent2014_3_4_scaffold_1860 173_002_scaffold_1860
Species: Clostridium botulinum (50%)
2 1876 bp 32.41 6.24 92.91
NECEvent2014_3_4_scaffold_1471 173_002_scaffold_1471
Species: Clostridium sporogenes (75%)
4 2479 bp 31.83 6.23 65.59
NECEvent2014_3_4_scaffold_828 173_002_scaffold_828
Species: Clostridium botulinum (80%)
5 4829 bp 31.97 6.21 87.66
NECEvent2014_3_4_scaffold_1660 173_002_scaffold_1660
Species: Clostridium botulinum (66.67%)
3 2154 bp 31.75 6.20 62.67
NECEvent2014_3_4_scaffold_1845 173_002_scaffold_1845
Species: Clostridium botulinum (75%)
4 1887 bp 33.60 6.20 93.48
NECEvent2014_3_4_scaffold_1024 173_002_scaffold_1024
Species: Clostridium botulinum (60%)
5 3783 bp 30.03 6.19 96.03
NECEvent2014_3_4_scaffold_2823 173_002_scaffold_2823
Species: Clostridium botulinum (50%)
2 1052 bp 30.13 6.13 98.10
NECEvent2014_3_4_scaffold_908 173_002_scaffold_908
Species: Clostridium sporogenes (50%)
4 4339 bp 30.54 6.12 90.30
NECEvent2014_3_4_scaffold_2217 173_002_scaffold_2217
Species: Clostridium sporogenes (50%)
2 1496 bp 32.29 6.12 95.86
NECEvent2014_3_4_scaffold_2628 173_002_scaffold_2628
Species: Clostridium sporogenes (100%)
1 1176 bp 30.78 6.12 91.33
NECEvent2014_3_4_scaffold_2132 173_002_scaffold_2132
Species: Clostridium botulinum (50%)
2 1569 bp 29.00 6.12 99.81
NECEvent2014_3_4_scaffold_1135 173_002_scaffold_1135
Species: Clostridium sporogenes (50%)
4 3390 bp 28.08 6.11 72.21
NECEvent2014_3_4_scaffold_1921 173_002_scaffold_1921
Species: Clostridium sporogenes (50%)
2 1793 bp 29.78 6.11 77.97
NECEvent2014_3_4_scaffold_2182 173_002_scaffold_2182
Species: Clostridium botulinum (100%)
2 1523 bp 27.45 6.11 84.11
NECEvent2014_3_4_scaffold_1179 173_002_scaffold_1179
Species: Clostridium botulinum (66.67%)
3 3214 bp 32.79 6.11 91.38
NECEvent2014_3_4_scaffold_1873 173_002_scaffold_1873
Species: Clostridium botulinum (100%)
1 1865 bp 30.51 6.11 99.89
NECEvent2014_3_4_scaffold_867 173_002_scaffold_867
Species: Clostridium botulinum (66.67%)
3 4573 bp 30.33 6.10 83.51
NECEvent2014_3_4_scaffold_1269 173_002_scaffold_1269
Species: Clostridium sporogenes (100%)
2 2903 bp 29.66 6.10 83.81
NECEvent2014_3_4_scaffold_1346 173_002_scaffold_1346
Species: Clostridium botulinum (100%)
3 2707 bp 31.95 6.10 84.56
NECEvent2014_3_4_scaffold_2125 173_002_scaffold_2125
Species: Clostridium botulinum (50%)
2 1575 bp 29.84 6.10 98.29
NECEvent2014_3_4_scaffold_876 173_002_scaffold_876
Species: Clostridium sporogenes (66.67%)
6 4533 bp 29.49 6.09 83.19
NECEvent2014_3_4_scaffold_1329 173_002_scaffold_1329
Species: Clostridium botulinum (50%)
2 2758 bp 32.49 6.09 87.02
NECEvent2014_3_4_scaffold_1637 173_002_scaffold_1637
Species: Clostridium botulinum (100%)
3 2197 bp 33.23 6.08 93.13
NECEvent2014_3_4_scaffold_902 173_002_scaffold_902
Species: Clostridium sporogenes (66.67%)
6 4366 bp 31.36 6.08 91.53
NECEvent2014_3_4_scaffold_701 173_002_scaffold_701
Species: Clostridium botulinum (58.33%)
12 5928 bp 32.47 6.07 97.62
NECEvent2014_3_4_scaffold_1595 173_002_scaffold_1595
Species: Clostridium botulinum (66.67%)
3 2275 bp 34.37 6.07 97.45
NECEvent2014_3_4_scaffold_1814 173_002_scaffold_1814
Species: Clostridium botulinum (100%)
1 1934 bp 31.95 6.05 99.90
Displaying items 51-100 of 1183 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.