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NECEvent2014_3_4_Clostridium_sporogenes-rel_29_5

NECEvent2014_3_4_Clostridium_botulinum_29_5
In projects: NECEvent2014_3_4

Consensus taxonomy: Clostridium botulinum  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Description

Related to C. botulinum and C. sporogenes

Displaying items 151-200 of 1183 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_4_scaffold_953 173_002_scaffold_953
Species: Clostridium botulinum (66.67%)
3 4109 bp 30.71 5.84 93.96
NECEvent2014_3_4_scaffold_805 173_002_scaffold_805
Species: Clostridium botulinum (50%)
4 4973 bp 30.61 5.82 97.00
NECEvent2014_3_4_scaffold_2854 173_002_scaffold_2854
Species: Clostridium botulinum (100%)
2 1031 bp 31.62 5.82 97.77
NECEvent2014_3_4_scaffold_1598 173_002_scaffold_1598
Species: Clostridium botulinum (100%)
4 2273 bp 28.11 5.81 68.76
NECEvent2014_3_4_scaffold_2673 173_002_scaffold_2673
Species: Clostridium sporogenes (100%)
1 1137 bp 31.49 5.80 77.84
NECEvent2014_3_4_scaffold_1403 173_002_scaffold_1403
Species: Clostridium sporogenes (100%)
2 2610 bp 30.77 5.80 85.98
NECEvent2014_3_4_scaffold_2089 173_002_scaffold_2089
Species: Clostridium sporogenes (100%)
1 1604 bp 30.11 5.80 54.24
NECEvent2014_3_4_scaffold_2236 173_002_scaffold_2236
Species: Clostridium botulinum (100%)
1 1476 bp 29.67 5.79 96.34
NECEvent2014_3_4_scaffold_2710 173_002_scaffold_2710
Species: Clostridium botulinum (50%)
2 1117 bp 29.19 5.77 94.00
NECEvent2014_3_4_scaffold_796 173_002_scaffold_796
Species: Clostridium botulinum (50%)
6 4997 bp 29.92 5.76 67.66
NECEvent2014_3_4_scaffold_1055 173_002_scaffold_1055
Species: Clostridium sporogenes (80%)
5 3675 bp 28.65 5.76 82.78
NECEvent2014_3_4_scaffold_2366 173_002_scaffold_2366
Species: Clostridium sporogenes (100%)
2 1355 bp 29.59 5.76 97.20
NECEvent2014_3_4_scaffold_1452 173_002_scaffold_1452
Genus: Clostridium (60%)
5 2505 bp 30.34 5.75 86.95
NECEvent2014_3_4_scaffold_2746 173_002_scaffold_2746
Species: Clostridium sporogenes (50%)
2 1096 bp 30.29 5.75 95.53
NECEvent2014_3_4_scaffold_2076 173_002_scaffold_2076
Species: Clostridium sporogenes (100%)
3 1616 bp 26.86 5.75 91.34
NECEvent2014_3_4_scaffold_2364 173_002_scaffold_2364
Species: Clostridium botulinum (100%)
1 1356 bp 27.65 5.75 97.12
NECEvent2014_3_4_scaffold_647 173_002_scaffold_647
Species: Clostridium botulinum (83.33%)
6 6711 bp 32.96 5.74 79.08
NECEvent2014_3_4_scaffold_1261 173_002_scaffold_1261
Species: Clostridium sporogenes (50%)
4 2925 bp 30.32 5.74 88.00
NECEvent2014_3_4_scaffold_2135 173_002_scaffold_2135
Species: Clostridium sporogenes (100%)
2 1567 bp 26.61 5.74 76.77
NECEvent2014_3_4_scaffold_2735 173_002_scaffold_2735
Species: Clostridium botulinum (100%)
1 1101 bp 31.06 5.72 100.00
NECEvent2014_3_4_scaffold_2042 173_002_scaffold_2042
Species: Clostridium sporogenes (100%)
2 1653 bp 26.86 5.72 66.42
NECEvent2014_3_4_scaffold_2582 173_002_scaffold_2582
Species: Clostridium sporogenes (100%)
2 1206 bp 28.86 5.72 99.75
NECEvent2014_3_4_scaffold_2868 173_002_scaffold_2868
Species: Clostridium sporogenes (100%)
1 1023 bp 28.35 5.72 99.71
NECEvent2014_3_4_scaffold_1040 173_002_scaffold_1040
Species: Clostridium botulinum (75%)
4 3728 bp 29.91 5.71 86.91
NECEvent2014_3_4_scaffold_1077 173_002_scaffold_1077
Species: Clostridium sporogenes (50%)
2 3573 bp 30.73 5.71 79.18
NECEvent2014_3_4_scaffold_857 173_002_scaffold_857
Species: Clostridium sporogenes (57.14%)
7 4621 bp 29.95 5.71 82.77
NECEvent2014_3_4_scaffold_2177 173_002_scaffold_2177
Species: Clostridium botulinum (100%)
2 1526 bp 30.34 5.70 101.44
NECEvent2014_3_4_scaffold_2824 173_002_scaffold_2824
Species: Clostridium botulinum (100%)
1 1052 bp 30.13 5.70 99.81
NECEvent2014_3_4_scaffold_1549 173_002_scaffold_1549
Genus: Clostridium (66.67%)
3 2341 bp 30.07 5.70 79.58
NECEvent2014_3_4_scaffold_1091 173_002_scaffold_1091
Species: Clostridium sporogenes (83.33%)
6 3529 bp 29.61 5.70 96.74
NECEvent2014_3_4_scaffold_2819 173_002_scaffold_2819
Species: Clostridium botulinum (100%)
1 1055 bp 26.26 5.69 99.81
NECEvent2014_3_4_scaffold_2677 173_002_scaffold_2677
Species: Clostridium botulinum (100%)
2 1135 bp 34.01 5.68 83.00
NECEvent2014_3_4_scaffold_1217 173_002_scaffold_1217
Species: Clostridium botulinum (100%)
3 3088 bp 29.89 5.68 87.44
NECEvent2014_3_4_scaffold_1022 173_002_scaffold_1022
Species: Clostridium botulinum (50%)
4 3803 bp 27.74 5.68 82.43
NECEvent2014_3_4_scaffold_2637 173_002_scaffold_2637
Species: Clostridium sporogenes (50%)
2 1164 bp 29.64 5.67 82.22
NECEvent2014_3_4_scaffold_958 173_002_scaffold_958
Species: Clostridium botulinum (66.67%)
3 4081 bp 30.12 5.66 95.49
NECEvent2014_3_4_scaffold_2012 173_002_scaffold_2012
Species: Clostridium botulinum (66.67%)
3 1695 bp 27.43 5.66 99.47
NECEvent2014_3_4_scaffold_1855 173_002_scaffold_1855
Species: Clostridium botulinum (50%)
2 1880 bp 27.61 5.66 95.27
NECEvent2014_3_4_scaffold_1645 173_002_scaffold_1645
Species: Clostridium botulinum (50%)
2 2177 bp 28.11 5.65 93.84
NECEvent2014_3_4_scaffold_932 173_002_scaffold_932
Species: Clostridium sporogenes (75%)
8 4222 bp 32.85 5.65 87.75
NECEvent2014_3_4_scaffold_1460 173_002_scaffold_1460
Species: Clostridium sporogenes (100%)
3 2496 bp 29.65 5.65 86.90
NECEvent2014_3_4_scaffold_2347 173_002_scaffold_2347
Species: Clostridium sporogenes (100%)
2 1381 bp 31.86 5.65 98.19
NECEvent2014_3_4_scaffold_1880 173_002_scaffold_1880
Species: Clostridium botulinum (100%)
3 1858 bp 28.09 5.65 88.64
NECEvent2014_3_4_scaffold_2632 173_002_scaffold_2632
Species: Clostridium sporogenes (100%)
2 1170 bp 32.39 5.64 97.44
NECEvent2014_3_4_scaffold_1740 173_002_scaffold_1740
Species: Clostridium sporogenes (66.67%)
3 2024 bp 29.50 5.63 72.18
NECEvent2014_3_4_scaffold_1504 173_002_scaffold_1504
Species: Clostridium botulinum (66.67%)
3 2423 bp 29.67 5.63 93.36
NECEvent2014_3_4_scaffold_2278 173_002_scaffold_2278
Species: Clostridium sporogenes (66.67%)
3 1439 bp 28.08 5.63 31.90
NECEvent2014_3_4_scaffold_821 173_002_scaffold_821
Species: Clostridium botulinum (100%)
4 4875 bp 26.38 5.63 87.14
NECEvent2014_3_4_scaffold_1080 173_002_scaffold_1080
Species: Clostridium botulinum (100%)
5 3568 bp 29.68 5.63 98.21
NECEvent2014_3_4_scaffold_1872 173_002_scaffold_1872
Species: Clostridium botulinum (100%)
2 1865 bp 29.76 5.63 96.51
Displaying items 151-200 of 1183 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.