ggKbase home page

NECEvent2014_3_4_Streptococcus_anginosus-rel_39_5

NECEvent2014_3_4_Streptococcus_anginosus_39_5
In projects: NECEvent2014_3_4

Consensus taxonomy: Streptococcus anginosus  →  Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying items 51-100 of 538 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
NECEvent2014_3_4_scaffold_2506
173_002_scaffold_2506
Species: Streptococcus anginosus (100%)
2 1249 bp 42.27 5.76 99.68
NECEvent2014_3_4_scaffold_2581
173_002_scaffold_2581
Species: Streptococcus anginosus (100%)
1 1207 bp 36.04 4.23 99.67
NECEvent2014_3_4_scaffold_2704
173_002_scaffold_2704
Species: Streptococcus anginosus (100%)
1 1120 bp 41.07 4.82 99.64
NECEvent2014_3_4_scaffold_2814
173_002_scaffold_2814
Species: Streptococcus anginosus (100%)
1 1057 bp 41.91 4.12 99.62
NECEvent2014_3_4_scaffold_2841
173_002_scaffold_2841
Species: Streptococcus anginosus (100%)
1 1039 bp 38.88 6.64 99.62
NECEvent2014_3_4_scaffold_1275
173_002_scaffold_1275
Species: Streptococcus anginosus (100%)
2 2885 bp 37.12 5.25 99.51
NECEvent2014_3_4_scaffold_2255
173_002_scaffold_2255
Species: Streptococcus anginosus (100%)
3 1460 bp 39.11 7.60 99.45
NECEvent2014_3_4_scaffold_2852
173_002_scaffold_2852
Species: Streptococcus intermedius (50%)
2 1032 bp 40.50 2.76 99.42
NECEvent2014_3_4_scaffold_1847
173_002_scaffold_1847
Species: Streptococcus anginosus (100%)
4 1886 bp 43.48 4.29 99.26
NECEvent2014_3_4_scaffold_1913
173_002_scaffold_1913
5 1809 bp 42.29 4.06 99.23
NECEvent2014_3_4_scaffold_1486
173_002_scaffold_1486
Species: Streptococcus anginosus (100%)
4 2455 bp 35.23 6.35 99.23
NECEvent2014_3_4_scaffold_1593
173_002_scaffold_1593
Species: Streptococcus anginosus (50%)
4 2277 bp 38.95 6.52 99.21
NECEvent2014_3_4_scaffold_1638
173_002_scaffold_1638
Species: Streptococcus anginosus (50%)
2 2196 bp 41.48 3.83 99.18
NECEvent2014_3_4_scaffold_2566
173_002_scaffold_2566
Species: Streptococcus anginosus (100%)
2 1216 bp 39.47 3.58 99.18
NECEvent2014_3_4_scaffold_1195
173_002_scaffold_1195
Species: Streptococcus anginosus (100%)
1 3155 bp 42.06 6.85 99.18
NECEvent2014_3_4_scaffold_2014
173_002_scaffold_2014
Species: Clostridium sporogenes (50%)
2 1689 bp 36.53 6.75 99.11
NECEvent2014_3_4_scaffold_2683
173_002_scaffold_2683
Species: Streptococcus anginosus (100%)
3 1130 bp 39.65 4.51 99.03
NECEvent2014_3_4_scaffold_1245
173_002_scaffold_1245
Genus: Streptococcus (100%)
3 3009 bp 33.43 4.14 99.00
NECEvent2014_3_4_scaffold_2518
173_002_scaffold_2518
Species: Streptococcus anginosus (100%)
2 1243 bp 43.85 6.64 98.95
NECEvent2014_3_4_scaffold_914
173_002_scaffold_914
Species: Streptococcus anginosus (100%)
1 4295 bp 35.79 5.73 98.91
NECEvent2014_3_4_scaffold_707
173_002_scaffold_707
Species: Streptococcus anginosus (50%)
6 5806 bp 34.03 5.63 98.85
NECEvent2014_3_4_scaffold_1410
173_002_scaffold_1410
Species: Streptococcus mitis (50%)
2 2597 bp 30.73 4.04 98.77
NECEvent2014_3_4_scaffold_1738
173_002_scaffold_1738
Species: Streptococcus anginosus (100%)
2 2026 bp 41.81 5.03 98.77
NECEvent2014_3_4_scaffold_2091
173_002_scaffold_2091
Species: Streptococcus intermedius (66.67%)
3 1601 bp 42.54 3.75 98.75
NECEvent2014_3_4_scaffold_1401
173_002_scaffold_1401
Species: Streptococcus anginosus (75%)
4 2610 bp 42.64 5.34 98.74
NECEvent2014_3_4_scaffold_2059
173_002_scaffold_2059
Species: Streptococcus anginosus (100%)
3 1632 bp 34.74 3.68 98.71
NECEvent2014_3_4_scaffold_1607
173_002_scaffold_1607
Species: Streptococcus anginosus (100%)
3 2252 bp 44.18 6.13 98.58
NECEvent2014_3_4_scaffold_584
173_002_scaffold_584
Phylum: Firmicutes (100%)
3 7871 bp 37.40 5.72 98.56
NECEvent2014_3_4_scaffold_2033
173_002_scaffold_2033
Species: Streptococcus anginosus (75%)
4 1671 bp 42.25 5.21 98.56
NECEvent2014_3_4_scaffold_1616
173_002_scaffold_1616
Species: Streptococcus gallolyticus (100%)
2 2232 bp 26.79 3.36 98.52
NECEvent2014_3_4_scaffold_1844
173_002_scaffold_1844
Species: Streptococcus anginosus (100%)
1 1888 bp 44.97 6.67 98.52
NECEvent2014_3_4_scaffold_972
173_002_scaffold_972
Species: Streptococcus sp. AS20 (66.67%)
3 4008 bp 39.60 4.38 98.43
NECEvent2014_3_4_scaffold_2114
173_002_scaffold_2114
Species: Streptococcus anginosus (100%)
3 1588 bp 30.98 5.20 98.43
NECEvent2014_3_4_scaffold_1889
173_002_scaffold_1889
Species: Streptococcus intermedius (66.67%)
3 1841 bp 30.47 4.64 98.42
NECEvent2014_3_4_scaffold_921
173_002_scaffold_921
Species: Streptococcus anginosus (80%)
5 4275 bp 40.28 4.91 98.39
NECEvent2014_3_4_scaffold_2553
173_002_scaffold_2553
Species: Streptococcus intermedius (50%)
2 1221 bp 40.29 4.30 98.28
NECEvent2014_3_4_scaffold_2458
173_002_scaffold_2458
Species: Streptococcus anginosus (100%)
1 1276 bp 41.77 5.76 98.28
NECEvent2014_3_4_scaffold_2559
173_002_scaffold_2559
Species: Streptococcus anginosus (100%)
2 1218 bp 38.92 3.82 98.28
NECEvent2014_3_4_scaffold_1315
173_002_scaffold_1315
Species: Streptococcus anginosus (100%)
2 2787 bp 40.47 4.31 98.17
NECEvent2014_3_4_scaffold_990
173_002_scaffold_990
Genus: Streptococcus (66.67%)
6 3955 bp 38.10 4.78 98.15
NECEvent2014_3_4_scaffold_1008
173_002_scaffold_1008
Species: Clostridium botulinum (50%)
4 3873 bp 36.51 6.27 98.14
NECEvent2014_3_4_scaffold_2345
173_002_scaffold_2345
Species: Chlamydia trachomatis (50%)
2 1382 bp 35.89 3.91 98.12
NECEvent2014_3_4_scaffold_874
173_002_scaffold_874
Species: Streptococcus anginosus (100%)
6 4542 bp 45.97 4.59 98.08
NECEvent2014_3_4_scaffold_1818
173_002_scaffold_1818
Species: Streptococcus anginosus (100%)
2 1924 bp 42.72 4.60 98.08
NECEvent2014_3_4_scaffold_1769
173_002_scaffold_1769
Species: Streptococcus anginosus (100%)
2 1983 bp 41.40 6.51 98.03
NECEvent2014_3_4_scaffold_1981
173_002_scaffold_1981
Species: Streptococcus anginosus (100%)
2 1726 bp 39.69 5.04 98.03
NECEvent2014_3_4_scaffold_2418
173_002_scaffold_2418
Species: Streptococcus intermedius (50%)
2 1314 bp 35.92 4.45 97.95
NECEvent2014_3_4_scaffold_1547
173_002_scaffold_1547
Species: Streptococcus anginosus (100%)
3 2345 bp 41.24 6.46 97.87
NECEvent2014_3_4_scaffold_961
173_002_scaffold_961
Species: Streptococcus anginosus (100%)
3 4065 bp 32.40 4.76 97.86
NECEvent2014_3_4_scaffold_1481
173_002_scaffold_1481
Species: Streptococcus anginosus (50%)
2 2461 bp 36.12 3.96 97.77
Displaying items 51-100 of 538 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.