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NECEvent2014_3_4_scaffold_540_1

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(2..274)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002 similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 91.0
  • Bit_score: 183
  • Evalue 1.00e-43
tyrosyl-tRNA synthetase (EC:6.1.1.1) similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 91.0
  • Bit_score: 170
  • Evalue 2.40e-40
Tyrosine--tRNA ligase n=2 Tax=Atopobium RepID=N2BIP0_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 91.0
  • Bit_score: 185
  • Evalue 2.50e-44

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 273
GTGCTTTCTGTTGATGAGCAACTCAAAATAATTACGTCTGGAACCATGCAGATTGTTCCCTTGGATGAACTCAAAAAGAAGCTCGAGAAGGGCTGCGCACTCAATATTAAGCTTGGCGTAGATCCAACCAGTCCTGACCTGCATTTGGGGCATGCAGTTCCCCTGCGCAAAATGCGTCAGTTCCAAGATTTGGGCCACAAAGTAACGCTCATTATTGGTAATGGCACCGCTTTGATTGGTGATCCCTCGGGTCGTGACTCCACTCGTCCTCCT
PROTEIN sequence
Length: 91
VLSVDEQLKIITSGTMQIVPLDELKKKLEKGCALNIKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHKVTLIIGNGTALIGDPSGRDSTRPP