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NECEvent2014_3_4_scaffold_540

Alias: 173_002_scaffold_540

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_540_1
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2..274)
DNA (273bp) protein (91aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=2 Tax=Atopobium RepID=N2BIP0_9ACTN
NECEvent2014_3_4_scaffold_540_2
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(427..2139)
DNA (1713bp) protein (571aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BN49_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ41631.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
hypothetical protein
NECEvent2014_3_4_scaffold_540_3
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2390..4465
DNA (2076bp) protein (692aa)
1A family penicillin-binding protein n=2 Tax=Atopobium RepID=N2BT05_9ACTN rbh
1A family penicillin-binding protein {ECO:0000313|EMBL:EMZ41630.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minut
penicillin-binding protein
NECEvent2014_3_4_scaffold_540_4
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(4624..5055)
DNA (432bp) protein (144aa)
Arginine repressor n=2 Tax=Atopobium RepID=N2BXI8_9ACTN
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ArgR family transcriptional regulator
NECEvent2014_3_4_scaffold_540_5
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(5236..6396)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BSU1_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ41628.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
NECEvent2014_3_4_scaffold_540_6
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(6390..6962)
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BIN5_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ41627.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
NECEvent2014_3_4_scaffold_540_7
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(6984..7451)
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BN45_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ41626.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
hypothetical protein
NECEvent2014_3_4_scaffold_540_8
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7600..8778
DNA (1179bp) protein (393aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BT01_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ41625.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
hypothetical protein
NECEvent2014_3_4_scaffold_540_9
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8903..9034)
DNA (132bp) protein (44aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BXI3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41624.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
Displaying 9 items

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