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NECEvent2014_3_4_scaffold_540_3

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 2390..4465

Top 3 Functional Annotations

Value Algorithm Source
1A family penicillin-binding protein n=2 Tax=Atopobium RepID=N2BT05_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 691.0
  • Bit_score: 1374
  • Evalue 0.0
  • rbh
1A family penicillin-binding protein {ECO:0000313|EMBL:EMZ41630.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minut similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 691.0
  • Bit_score: 1374
  • Evalue 0.0
penicillin-binding protein similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 698.0
  • Bit_score: 837
  • Evalue 2.00e-240

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2076
ATGGGTGTTCGCACACGGAGAGCTCATAGGCATGCTCAAACTCATGCTTTTGGCTTTGGTGTACTTGGCGTCTTTGGTTTTATTGGACTGTTGGGTATTGCACTCATGGTCTCCTTGGGTTCGCTTATGGCCTTTTGGCTAACTGACCTGCCAGATTACAAATCTGCAGATGCCTACTTGGTTGCAGAACCAACCACCGTATATGACGTCAAGGGCAATGTTATTGCCAACTTTTACCTACAAAACCGTAAAAGTGTAACCATGGAAGACGTCTCCCCCTACGTTCTTAAAGGTACCGTAGATACCGAGGACCTTCGTTTTTACAAGCACAACGGCGTGGACCCCTATGGCATTATGCGCGCGATATTTTCTAATGCCTCTGGTGGATCAGAAGGTGCATCCACCATTACGCAGCAGCTCGTTCGCAACACTGTTTTGTCGGACGAACAGTTTGATAAGACTATCAAGCGTAAAGTACGTGAGGCCTACATTGCTGTAGAGATGGAAAAGACCTACACCAAAGATCAGATTCTTATGATGTACCTCAATACCATTTACTATGGCCAGGGAGCCTACGGTATTGAGGCTGCCTCTATTACGTACTTTAACAAGCACGCTAATGAGCTAACGCTTGCAGAAGCAGCAACTCTTGTGGGTATTCCCAACTCCCCTACTGCCTACGACCCTACGGTTAACCCCAATGACTCCAAAGCCCGTCGCAACCTCGTTCTTAAGCGTATGCTCAAGCAGGGCGACATTACGCAAGAAGAGTATGACGCAGCTTCTCAGGAAGACATCGTACTTAACCGTGGTCAGTCTGTAACCAGCGAGAAGGGCAAGTACCCATACTTTACCAGCTATATTGCATCGCTGTTATCCGAGGATTTTGATGCTAAGACCATCTATCAGGGTGGTATGAAGGTATACACCACGCTCGATCCAGACAAGCAGGAAGCTGCCGAGAAGGCCGTCCAGGCACAGCTTGATTCCATTGGTAATAAAGAGCTGGAAAGCGCTTTGGTGGCCATCAACAACAAGAATGGCTACATTGATGCCATGGTAGGTGGACGTGACTATGACACCAACCAATTTAACCTGGCAACACAGGCTCGCCGTCAACCGGGCTCCAGCTTTAAGGCCTTTACGTTAGCTGCAGCTATTTCCCAGGGACTTAATCCTCAAACCTACCTTAACTGCAACTCACCCATCCAGGTAACGCCTACGTGGCGCGTTCAAAACTATGGCAATACCAACTATGGCACCATCTCTTTTGCACGCGCAACAGAGATTTCTTCCAACACGGGCTATGTACAAGTTGCGCAGGCTATTGGTGGCTCTGCTATTTCTAGTACCGCAAAGAGTATGGGTATTGGAGTAGACATTCCCTCGTACGCATCTATTACTTTGGGTACCATTGGTGTTCCACCCATACAGATGGCAGAGGCCTATTCCACCTTGGCTAACAACGGCATTCACCGTAATGCGGTTGCCATTACTAAGATTGAGGACCGCAACAATAACACGGTATATGAGCATAAGGAGCAAAGCTCTCAAGCCATTTCTGGTGAAGTAGCCTATGCAACCACACAGGTACTGCAAGGTGTTGTTTCCAACGGTACCGCTACGGCTGTACGCAGCTATGCTCCCCATGTTAACCAGCCTATTGCTGGTAAAACGGGTACTACAGAAAACGCTCGCGACCTGTGGTTTGTAGGCTATACGCCTCAAACTACCGTTGCCGTTTGGACTGGCTTTAGAGAAGAAAAGACCATCTATGTGCATGGCTCTGCTGGCCACCCCTCCAACACCTCCTGTCCCATTCTTGGTAGGTATTTGGAAATGACCTTAGCAGGTGCCGAGCGCCAGGAATTTACTTCTAGCCCTGCACCAACCTACAAACCCGCTAGTTCATGGCCGTTTGCTAAGTATCAAAAGCCAGAAACTCTTGCACAAACACTGGAAGACAACTCTCAAACAGAGGAAGAGACAGATCAGCAAGACACGGATGATACCGAACCCACCACCTCTACCGCTCCTGATTCCAATTCTTCTGATGAGGCCGCTGGGGACGAGTAA
PROTEIN sequence
Length: 692
MGVRTRRAHRHAQTHAFGFGVLGVFGFIGLLGIALMVSLGSLMAFWLTDLPDYKSADAYLVAEPTTVYDVKGNVIANFYLQNRKSVTMEDVSPYVLKGTVDTEDLRFYKHNGVDPYGIMRAIFSNASGGSEGASTITQQLVRNTVLSDEQFDKTIKRKVREAYIAVEMEKTYTKDQILMMYLNTIYYGQGAYGIEAASITYFNKHANELTLAEAATLVGIPNSPTAYDPTVNPNDSKARRNLVLKRMLKQGDITQEEYDAASQEDIVLNRGQSVTSEKGKYPYFTSYIASLLSEDFDAKTIYQGGMKVYTTLDPDKQEAAEKAVQAQLDSIGNKELESALVAINNKNGYIDAMVGGRDYDTNQFNLATQARRQPGSSFKAFTLAAAISQGLNPQTYLNCNSPIQVTPTWRVQNYGNTNYGTISFARATEISSNTGYVQVAQAIGGSAISSTAKSMGIGVDIPSYASITLGTIGVPPIQMAEAYSTLANNGIHRNAVAITKIEDRNNNTVYEHKEQSSQAISGEVAYATTQVLQGVVSNGTATAVRSYAPHVNQPIAGKTGTTENARDLWFVGYTPQTTVAVWTGFREEKTIYVHGSAGHPSNTSCPILGRYLEMTLAGAERQEFTSSPAPTYKPASSWPFAKYQKPETLAQTLEDNSQTEEETDQQDTDDTEPTTSTAPDSNSSDEAAGDE*