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NECEvent2014_3_4_scaffold_544_3

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 2893..3357

Top 3 Functional Annotations

Value Algorithm Source
PTS system, mannose/fructose/sorbose family, IIA component n=2 Tax=Atopobium RepID=N2C0T5_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 154.0
  • Bit_score: 305
  • Evalue 3.70e-80
  • rbh
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:EMZ42789.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 154.0
  • Bit_score: 305
  • Evalue 5.20e-80
PTS system fructose subfamily transporter subunit IIA similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 137.0
  • Bit_score: 129
  • Evalue 7.90e-28

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGGTTGGCTTTATCATTACCGGGCATGGTGATTTTGCAACGGGGCTATACAGTGCGCTTGCGATGATCGCTGGCGAGCAAGACGGAGTGGTTGCAGTTACCTTCCACGAGGATGAAGCAGCAAGCTTTGGCAACAAGCTTACGGATGCAATAACAAACCTGCGCGCCACAACCGATGGCATTGTCATATTGTGTGACCTTATCGGTGGCACTCCCTTTAACCAGGCCATGTTGGCTGCTCAAGCCTTTGACAGCGTAGAGGTAGTGGCAGGCGTCAACCTGCCCATGCTGCTTGAGTGCATCATGGGACGCGAGATGGGTATTGGAGTGCGCGAGTTATGCGTCAACGCCGTGTCATCTGATGTGCTTGGTATCGCTCACATGTCAATTGATGCCGTTACGCAGGACGAAGCTTCGGATGCCGCTTGTTATGATGTCGATTTTGATGAAGAAGAAGGCATCTAA
PROTEIN sequence
Length: 155
MVGFIITGHGDFATGLYSALAMIAGEQDGVVAVTFHEDEAASFGNKLTDAITNLRATTDGIVILCDLIGGTPFNQAMLAAQAFDSVEVVAGVNLPMLLECIMGREMGIGVRELCVNAVSSDVLGIAHMSIDAVTQDEASDAACYDVDFDEEEGI*