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NECEvent2014_3_4_scaffold_544

Alias: 173_002_scaffold_544

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_544_1
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3..1025
DNA (1023bp) protein (341aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2VRB7_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ42787.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
Predicted dehydrogenases and related proteins
NECEvent2014_3_4_scaffold_544_2
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1112..2536
DNA (1425bp) protein (475aa)
MATE efflux family protein n=2 Tax=Atopobium RepID=N2BW21_9ACTN rbh
MATE efflux family protein {ECO:0000313|EMBL:EMZ42788.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 1006397
transmembrane protein in upf0013
NECEvent2014_3_4_scaffold_544_3
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2893..3357
DNA (465bp) protein (155aa)
PTS system, mannose/fructose/sorbose family, IIA component n=2 Tax=Atopobium RepID=N2C0T5_9ACTN rbh
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:EMZ42789.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" s
PTS system fructose subfamily transporter subunit IIA
NECEvent2014_3_4_scaffold_544_4
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3357..3653
DNA (297bp) protein (99aa)
Preprotein translocase, YajC subunit n=2 Tax=Atopobium RepID=N2BW46_9ACTN
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EMZ42790.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minut
YajC family protein
NECEvent2014_3_4_scaffold_544_5
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3790..4272
DNA (483bp) protein (161aa)
PTS system mannose/fructose/sorbose family transporter subunit IIB (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component n=2 Tax=Atopobium RepID=N2BR91_9ACTN rbh
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:EMZ42791.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" s
NECEvent2014_3_4_scaffold_544_6
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4456..5262
DNA (807bp) protein (269aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BM03_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ42792.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
hypothetical protein
NECEvent2014_3_4_scaffold_544_7
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5252..6322
DNA (1071bp) protein (357aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BW25_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ42793.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
PTS system N-acetylgalactosamine-specific transporter subunit IID
NECEvent2014_3_4_scaffold_544_8
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6406..7143
DNA (738bp) protein (246aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2C0T9_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ42794.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
GntR family transcriptional regulator
NECEvent2014_3_4_scaffold_544_9
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7172..8344
DNA (1173bp) protein (391aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BW50_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ42795.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
sugar isomerase (SIS)
NECEvent2014_3_4_scaffold_544_10
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8344..8913
DNA (570bp) protein (190aa)
1-phosphofructokinase (EC:2.7.1.144)
1-phosphofructokinase family hexose kinase n=2 Tax=Atopobium RepID=N2BR96_9ACTN rbh
1-phosphofructokinase family hexose kinase {ECO:0000313|EMBL:EMZ42796.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium
Displaying 10 items

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