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NECEvent2014_3_4_scaffold_544_5

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 3790..4272

Top 3 Functional Annotations

Value Algorithm Source
PTS system mannose/fructose/sorbose family transporter subunit IIB (EC:2.7.1.69) similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 159.0
  • Bit_score: 238
  • Evalue 1.30e-60
PTS system, mannose/fructose/sorbose family, IIB component n=2 Tax=Atopobium RepID=N2BR91_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 318
  • Evalue 4.40e-84
  • rbh
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:EMZ42791.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 318
  • Evalue 6.20e-84

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGGCGGAGCCAAATATCGTTCTTGTGAGGATTGATAACCGTTTGCTGCATGGTCAAGTTGCTACTCAGTGGGCAAAAAGTATTGACTGCAATCTTATTCTGGTGGCTAATGATGACATTGCGGGCAACAAAATGCGCCAAAACCTGTGCAACATGGCGGCCCCACAGGGCATGGCTACCAGGTATTTCTCGCTTCAGAAGACCATTGATGTCATTCACAAAGCCGCCCCTCGTCAGCATATTTTTATCGTTATTGAAACCCCGCAAGATGCGCTCAAGCTCGTTGAGGGTGGTGTGCCCATCAAAAAGATCAACATTGGCAACATGCACATGTCTGGCGATAAACGCCAGGTAGCAACCTCTGTTGCCGTTGATGATGAGGATGTTGCCACCTTCAAGAAGCTCCAAGAGCTGGGCGTTGAGCTCTTTATCCAACGTGTTCCCACGACGCCGGTTGAGTCTACCGAGAAGCTCTTTAGGTAG
PROTEIN sequence
Length: 161
MAEPNIVLVRIDNRLLHGQVATQWAKSIDCNLILVANDDIAGNKMRQNLCNMAAPQGMATRYFSLQKTIDVIHKAAPRQHIFIVIETPQDALKLVEGGVPIKKINIGNMHMSGDKRQVATSVAVDDEDVATFKKLQELGVELFIQRVPTTPVESTEKLFR*