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NECEvent2014_3_4_scaffold_420_4

Organism: NECEvent2014_3_4_Atopobium_minutum-rel_49_5

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(6397..7569)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 398.0
  • Bit_score: 453
  • Evalue 6.00e-125
23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Atopobium RepID=N2BR32_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 389.0
  • Bit_score: 788
  • Evalue 3.70e-225
  • rbh
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EMZ42741.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 389.0
  • Bit_score: 788
  • Evalue 5.10e-225

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
ATGGGATACCGCACTTACACCTGTCCTATTGCTCGCCAATGTGGCGGCTGTGAGTGGCTTAGTGTGCCCTACCCCATTCAGCTGCGACGCAAACAAGAGGCAATGGTTAGCCTGTTTGAAGACCTTGCCAAGGCAGATGGCTGCGAGGTTTTGCCCATTGTTGGTATGGACGAGCCTCGTTTTTATCGCTATAAAGCTGCAACGCCCTTTGCTCCTGGTACGCGAGGGTGTATTCGCAGCGGCTTTTTTGCGCAGGGATCACACCGCATTGTACCCTGTGCAGAATGCCTGGTAGAAGAGGCAAGTCTGCGCCCCATTCTTAATAGCGTTGCTCGCGTGGCAGAACGCGTAGGCGTGAGCGCCTACCAAGAGGACAAGGGCAAGGGACTTTTGCGCCACGCCATTGTGAGAAAAGCCATGGTGGGTGGGGAGATTTTGCTCACCATTGTTACTAACGGCAACCATATTCCTCAACGGCTGCGCTTTGTGGATGAACTCCTCTCCGCGCACCCCGAGATTACCAGCATTGTTCAAAACGTAAACACCCGACGCACCAATGCTATGCTGGGCAATCACAATGATGTCTTATATGGCACAGGCGTCATTCACGATAGTTTGCTCGGCTGTAGGTTTGAGCTTGGAGCTACCTCGTTTTATCAGACCAATCCCCAACAAACCGAGAAGCTCTACTCTCTTGCGCTGGAAGCTGCACAGCTAAAGCCTGGCACGCACTTGCTGGATGCCTACTGCGGTACAGGCACCATTGGCTTATGCGCAGCTCATAGCTGCAAAAATATAAAACTGGTTGGTGTGGAGCGCGGTCAGGAAGCTGTGGTGAACGCCAAGCGCAACGCTCGCGCCAATGGCCTAGAGAATACCGCACGCTTTATCAGAGCCGATGCAACAGAATATCTTTCTAGTAAACAGAGCGATAAAACCTACGATGTTATTATGCTTGATCCACCGCGCGCCGGATCCACTCCTGAGTTTTTATCGGCCGCCAGCGACTGCCATCCTGAAAGAATTGTCTATATTTCTTGCAATCCACAAACACAAGTTCGTGACCTGTGGTTTTTGCATCAAAAGGGCTGGAAGCTAGCGTCTGTTACCCCCGTGGATATGTTTCCACATACCAAGCACGTTGAGACTGTCGTATTGATGTCAAAGGCTTAA
PROTEIN sequence
Length: 391
MGYRTYTCPIARQCGGCEWLSVPYPIQLRRKQEAMVSLFEDLAKADGCEVLPIVGMDEPRFYRYKAATPFAPGTRGCIRSGFFAQGSHRIVPCAECLVEEASLRPILNSVARVAERVGVSAYQEDKGKGLLRHAIVRKAMVGGEILLTIVTNGNHIPQRLRFVDELLSAHPEITSIVQNVNTRRTNAMLGNHNDVLYGTGVIHDSLLGCRFELGATSFYQTNPQQTEKLYSLALEAAQLKPGTHLLDAYCGTGTIGLCAAHSCKNIKLVGVERGQEAVVNAKRNARANGLENTARFIRADATEYLSSKQSDKTYDVIMLDPPRAGSTPEFLSAASDCHPERIVYISCNPQTQVRDLWFLHQKGWKLASVTPVDMFPHTKHVETVVLMSKA*