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NECEvent2014_3_4_scaffold_420

Alias: 173_002_scaffold_420

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_420_1
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..2489
DNA (2487bp) protein (829aa)
Type III restriction enzyme, res subunit n=1 Tax=Lactobacillus iners SPIN 1401G RepID=F3LZN9_9LACO rbh
Restriction endonuclease subunit R {ECO:0000313|EMBL:KGF09613.1}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridi
type III restriction protein res subunit
NECEvent2014_3_4_scaffold_420_2
Bifidobacterium boum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2524..3444
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Lactobacillus iners SPIN 1401G RepID=F3LZP0_9LACO rbh
Uncharacterized protein {ECO:0000313|EMBL:KFI48414.1}; TaxID=78343 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium boum.;"
hypothetical protein
NECEvent2014_3_4_scaffold_420_3
Bifidobacterium boum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3458..6109
DNA (2652bp) protein (884aa)
Helicase C-terminal domain protein n=1 Tax=Lactobacillus iners SPIN 1401G RepID=F3LZP1_9LACO rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:KFI48413.1}; TaxID=78343 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium boum.;"
helicase domain-containing protein
NECEvent2014_3_4_scaffold_420_4
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(6397..7569)
DNA (1173bp) protein (391aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Atopobium RepID=N2BR32_9ACTN rbh
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EMZ42741.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobiu
NECEvent2014_3_4_scaffold_420_5
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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7816..9876
DNA (2061bp) protein (687aa)
Putative translation elongation factor G n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2TQS5_9ACTN rbh
Translation elongation factor G {ECO:0000313|EMBL:EMZ42742.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10
small GTP-binding protein
NECEvent2014_3_4_scaffold_420_6
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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10084..11460
DNA (1377bp) protein (459aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BVW8_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ42743.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
hypothetical protein
NECEvent2014_3_4_scaffold_420_7
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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11730..12332
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2C0P3_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ42744.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
hypothetical protein
NECEvent2014_3_4_scaffold_420_8
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12363..13019
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BVZ3_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ42745.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
hypothetical protein
NECEvent2014_3_4_scaffold_420_9
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13147..13653
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BR37_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ42746.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
hypothetical protein
NECEvent2014_3_4_scaffold_420_10
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13766..14596
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2TPZ4_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ42747.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
PRC-barrel domain-containing protein
Displaying 10 items

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