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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_1
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72..353)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DE08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI94578.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_2
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(350..820)
DNA (471bp) protein (157aa)
Putative haloacid dehalogenase-like hydrolase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B231_CLOA9
haloacid dehalogenase-like hydrolase
Putative haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:AFS78716.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (stra
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_3
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(841..1584)
DNA (744bp) protein (248aa)
pstB2; phosphate ABC transporter ATP-binding protein (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran rbh
Phosphate ABC transporter ATP-binding protein PstB n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B0W2_CLOA9 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_4
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1575..2420)
DNA (846bp) protein (282aa)
Phosphate ABC transporter permease protein PstA n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AY57_CLOA9 rbh
pstA2; phosphate ABC transporter permease
Phosphate ABC transporter permease protein PstA {ECO:0000313|EMBL:AFS78718.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (st rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_5
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2439..3299)
DNA (861bp) protein (287aa)
Phosphate ABC transporter permease protein PstC n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZM0_CLOA9 rbh
pstC2; phosphate ABC transporter permease
Phosphate ABC transporter permease protein PstC {ECO:0000313|EMBL:AFS78719.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (st rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_6
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3341..4243)
DNA (903bp) protein (301aa)
ABC transporter phosphate-binding protein PstS n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B181_CLOA9 rbh
pstS2; phosphate ABC transporter substrate-binding protein PstS
ABC transporter phosphate-binding protein PstS {ECO:0000313|EMBL:AFS78720.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (str rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_7
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(4420..5583)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Fischerella thermalis RepID=UPI0002DE2C4E rbh
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_8
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5759..6265)
DNA (507bp) protein (169aa)
GCN5-related N-acetyltransferase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MHR7_ALKOO
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABW19349.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_9
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6300..7286)
DNA (987bp) protein (329aa)
Putative 1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:CCQ96738.1}; EC=3.5.99.7 {ECO:0000313|EMBL:CCQ96738.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; rbh
D-cysteine desulfhydrase (EC:4.4.1.15)
Putative 1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=Clostridium ultunense Esp RepID=M1ZF63_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_10
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7629..9098
DNA (1470bp) protein (490aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MLN0_ALKOO rbh
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABW17947.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilu rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_11
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9203..10195)
DNA (993bp) protein (331aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphil rbh
Lipoyltransferase and lipoate-protein ligase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEB8_ALKOO rbh
lipoyltransferase and lipoate-protein ligase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10224..11855)
DNA (1632bp) protein (544aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Clostridium ultunense Esp RepID=M1ZDS8_9CLOT rbh
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:CCQ96731.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultune rbh
RNA-metabolising metallo-beta-lactamase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_13
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11891..13129)
DNA (1239bp) protein (413aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (EC:1.7.1.-)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Clostridium ultunense Esp RepID=M1Z485_9CLOT rbh
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:CCQ92564.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_14
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13198..13692)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JUW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ83600.1}; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium oral tax
putative HAD hydrolase, IIB family
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_15
unknown

Not on your lists

comp(13876..14049)
DNA (174bp) protein (58aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_16
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14067..14237)
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:ABR46763.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (stra
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_17
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14311..14961)
DNA (651bp) protein (217aa)
Mpv17/PMP22 n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TBS8_9CLOT
Mpv17/PMP22 {ECO:0000313|EMBL:EGD48099.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_18
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(15042..16466)
DNA (1425bp) protein (475aa)
Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase) n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FJR5_9FIRM rbh
Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase) {ECO:0000313|EMBL:CDB02302.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicu rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16588..18120)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH41_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EGJ45680.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae b rbh
Na+/H+ antiporter NhaC
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_20
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(18341..19690)
DNA (1350bp) protein (450aa)
Arginine utilization regulatory protein RocR n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZU2_9FIRM rbh
Arginine utilization regulatory protein RocR {ECO:0000313|EMBL:CDB02301.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;" rbh
arginine utilization regulatory protein RocR
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_21
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19865..21418)
DNA (1554bp) protein (518aa)
UPF0061 protein HMPREF0083_01523 n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WP79_ANEAE rbh
UPF0061 protein HMPREF0083_01523 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" sourc rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_22
Exiguobacterium sp. AT1b, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21663..22547)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002F2AEBC rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACQ69748.1}; TaxID=360911 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_23
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22715..23758)
DNA (1044bp) protein (348aa)
Putative Bacterial extracellular solute-binding protein n=1 Tax=Clostridium ultunense Esp RepID=M1YPU1_9CLOT rbh
Putative Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:CCQ92565.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl rbh
extracellular solute-binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_24
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23760..24545)
DNA (786bp) protein (262aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
Spermidine/putrescine ABC transporter, permease protein 2 n=1 Tax=Clostridium ultunense Esp RepID=M1Z3F2_9CLOT rbh
Spermidine/putrescine ABC transporter, permease protein 2 {ECO:0000313|EMBL:CCQ92566.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=" rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_25
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24539..25378)
DNA (840bp) protein (280aa)
Polyamine transporter subunit membrane component of ABC superfamily n=1 Tax=Clostridium ultunense Esp RepID=M1ZFT6_9CLOT rbh
Polyamine transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CCQ92567.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.; rbh
binding-protein-dependent transport system inner membrane protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25375..26415)
DNA (1041bp) protein (347aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostr rbh
Polyamine transporter subunit ATP-binding component of ABC superfamily n=1 Tax=Clostridium ultunense Esp RepID=M1Z4U8_9CLOT rbh
spermidine/putrescine ABC transporter ATP-binding subunit
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_27
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26435..26974)
DNA (540bp) protein (180aa)
Cupin domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z490_9CLOT rbh
Cupin domain protein {ECO:0000313|EMBL:CCQ92569.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
HTH-type transcriptional regulator with cupin domain
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_28
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27229..27996)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z4V3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ92573.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_29
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28008..28565)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z495_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ92574.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
lemA protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_4_30
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28583..29749)
DNA (1167bp) protein (389aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein T rbh
thiI; tRNA sulfurtransferase ThiI (EC:2.8.1.4)
Probable tRNA sulfurtransferase n=1 Tax=Clostridium ultunense Esp RepID=M1Z4V8_9CLOT rbh
Displaying items 1-30 of 39 in total

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