ggKbase home page

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_1
unknown

Not on your lists

1..888
DNA (888bp) protein (296aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_2
Thermoanaerobacterium xylanolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

925..2229
DNA (1305bp) protein (435aa)
Radical SAM domain protein n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BG15_THEXL
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:AEF16305.1}; TaxID=858215 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaer
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_3
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2226..3554
DNA (1329bp) protein (443aa)
Radical SAM domain protein n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JNM9_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:ERJ81627.1}; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium oral
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3572..5212
DNA (1641bp) protein (547aa)
Putative ABC transporter related n=1 Tax=Clostridium botulinum NCTC 2916 RepID=B1QB38_CLOBO
Putative ABC transporter ATP-binding protein/permease {ECO:0000313|EMBL:BAQ14490.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
ABC transporter ATP-binding protein/permease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_5
unknown

Not on your lists

5205..6119
DNA (915bp) protein (305aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_6
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6335..7267
DNA (933bp) protein (311aa)
Putative ABC transporter, ATP-binding protein SagG n=1 Tax=Clostridium ultunense Esp RepID=M1ZKX7_9CLOT rbh
Putative ABC transporter, ATP-binding protein SagG {ECO:0000313|EMBL:CCQ96222.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri rbh
ABC transporter ATP-binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7269..8324
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZCK7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ96221.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_8
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8311..9435
DNA (1125bp) protein (375aa)
Putative ABC-2 type transporter n=1 Tax=Clostridium ultunense Esp RepID=M1Z079_9CLOT rbh
Putative ABC-2 type transporter {ECO:0000313|EMBL:CCQ96220.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp. rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9907..10425
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MV77_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX44413.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_10
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10548..11087)
DNA (540bp) protein (180aa)
Methyltransferase domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WQS8_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:EJF38761.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
methylase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_11
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11468..12373
DNA (906bp) protein (302aa)
Helix-turn-helix type 11 domain-containing protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TBX6_9CLOT rbh
Helix-turn-helix type 11 domain-containing protein {ECO:0000313|EMBL:EGD48147.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[ rbh
helix-turn-helix domain-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_12
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12434..13141
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZG4_CLOSW rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL06190.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_13
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13171..13611
DNA (441bp) protein (147aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Clostridium intestinale URNW RepID=U2NMJ0_9CLOT
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:ERK30056.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13656..14132
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2P7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97767.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
acetyltransferase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_15
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14516..16201
DNA (1686bp) protein (562aa)
Putative PAS/PAC sensor protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CBN2_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:KEZ85937.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;" rbh
Iron only hydrogenase large subunit, C-terminal domain
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_16
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16216..17382
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NCU0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB89726.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;" rbh
Stage II sporulation protein E (SpoIIE).
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_17
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17462..17914
DNA (453bp) protein (151aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
tRNA-specific adenosine deaminase n=1 Tax=Clostridium ultunense Esp RepID=M1Z8V7_9CLOT
TadA protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_18
unknown

Not on your lists

comp(17970..18101)
DNA (132bp) protein (44aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_19
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18537..20885
DNA (2349bp) protein (783aa)
Excinuclease ATPase subunit n=1 Tax=Clostridium sp. BNL1100 RepID=H2JHW5_9CLOT rbh
Excinuclease ATPase subunit
Excinuclease ATPase subunit {ECO:0000313|EMBL:AEY66950.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;" rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_20
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20882..21799
DNA (918bp) protein (306aa)
Beta-lactamase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R341_9CLOT rbh
Beta-lactamase {ECO:0000313|EMBL:EPR12961.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;" rbh
beta-lactamase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_21
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21887..22111)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DKF1_DESRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG59211.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (stra
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_22
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22272..23225)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WYE0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EJF41331.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;" rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_23
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(23460..24944)
DNA (1485bp) protein (495aa)
Amine oxidase id=1905218 bin=GWB2_Clostridiales_37_7 species=Ethanoligenens harbinense genus=Ethanoligenens taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good + rbh
amine oxidase Tax=GWB2_Clostridiales_37_7_curated rbh
amine oxidase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_24
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24950..25522)
DNA (573bp) protein (191aa)
TetR family transcriptional regulator n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7ELA8_CLOPA
transcriptional regulator, TetR family
Tax=BJP_IG2157_Clostridiales_35_16
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26987..29731
DNA (2745bp) protein (915aa)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q357_CLONN rbh
Calcium ABC transporter ATPase {ECO:0000313|EMBL:KEH94813.1}; TaxID=1443126 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D s rbh
ATPase P
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29754..30377)
DNA (624bp) protein (208aa)
Putative sporulation protein YtaF n=1 Tax=Clostridium ultunense Esp RepID=M1ZF26_9CLOT
Putative sporulation protein YtaF {ECO:0000313|EMBL:CCQ96944.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Es
conserved membrane protein YtaF
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_27
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30745..32208
DNA (1464bp) protein (488aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A5R3_DESDJ rbh
penicillin-binding protein, beta-lactamase class C
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:AFL99297.1}; Flags: Precursor;; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobac rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_28
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32456..33388
DNA (933bp) protein (311aa)
Transcriptional regulator, AraC family n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJS9_CELLD rbh
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADZ82121.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilytic rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_29
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33677..34090
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AKY7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66514.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_11_30
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(34269..35195)
DNA (927bp) protein (309aa)
Putative uncharacterized protein id=4206610 bin=GWF2_Clostridiales_36_10 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute rbh
hypothetical protein Tax=GWF2_Clostridiales_36_10_curated rbh
hypothetical protein
Displaying items 1-30 of 104 in total

View Taxonomy