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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1254
DNA (1254bp) protein (418aa)
Cation diffusion facilitator family transporter n=6 Tax=Clostridium difficile RepID=D5Q8R8_CLODI rbh
Putative cation efflux protein {ECO:0000313|EMBL:CCK88230.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridiu rbh
cation efflux protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_2
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

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1340..1543
DNA (204bp) protein (68aa)
hypothetical protein Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
Putative uncharacterized protein id=2037118 bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1635..3095
DNA (1461bp) protein (487aa)
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:CCQ94629.1}; EC=3.4.13.- {ECO:0000313|EMBL:CCQ94629.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost rbh
aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Aminoacyl-histidine dipeptidase n=1 Tax=Clostridium ultunense Esp RepID=M1Z9V8_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3133..4014)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00031E88C2 rbh
Transcriptional regulator {ECO:0000313|EMBL:EKQ56925.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34
bsdA2; HTH-type transcriptional regulator BsdA
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4129..5472
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002D943C6 rbh
MATE efflux family protein {ECO:0000313|EMBL:KIE45415.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 27 rbh
matE2; MATE efflux family protein MatE
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_6
Aerococcus urinae, Aerococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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5526..5756
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Bacillus sp. 10403023 RepID=UPI0002880532
hypothetical protein
UPF0291 protein HMPREF9243_1831 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=866775 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Aerococcus.;" source="Aerococcus urinae (strain
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_7
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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5934..7652
DNA (1719bp) protein (573aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae;
Sensory transduction protein kinase n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q891P6_CLOTE
sensory transduction protein kinase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_8
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7655..9031
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002DC0DD0 rbh
Transcriptional response regulator {ECO:0000313|EMBL:KAJ48857.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorph rbh
transcriptional response regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_9
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9532..10590
DNA (1059bp) protein (353aa)
Putative membrane protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B4D8_CLOA9 rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFS79800.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 6 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_10
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10615..11202
DNA (588bp) protein (196aa)
entB; isochorismatase EntB (EC:3.3.2.1)
Isochorismatase EntB {ECO:0000313|EMBL:AFS79799.1}; EC=3.3.2.1 {ECO:0000313|EMBL:AFS79799.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridi rbh
Isochorismatase EntB n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2T5_CLOA9 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11344..12039
DNA (696bp) protein (232aa)
Cyclase family protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZLY8_9CLOT rbh
Cyclase family protein {ECO:0000313|EMBL:CCQ98027.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
cyclase family protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12082..12639
DNA (558bp) protein (186aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr rbh
ubiX; 3-octaprenyl 4-hydroxybenzoate carboxylyase UbiX (EC:4.1.1.-)
Putative aromatic acid decarboxylase n=1 Tax=Clostridium ultunense Esp RepID=M1ZHM2_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_13
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12654..14003
DNA (1350bp) protein (450aa)
UbiD family decarboxylase n=1 Tax=Clostridium ultunense Esp RepID=M1ZI08_9CLOT rbh
UbiD family decarboxylase {ECO:0000313|EMBL:CCQ98023.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
UbiD family decarboxylase rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_14
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14176..14457
DNA (282bp) protein (94aa)
Putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZLY7_9CLOT
Putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein {ECO:0000313|EMBL:CCQ98022.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; C
microcompartments protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_15
unknown

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14460..14693
DNA (234bp) protein (78aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_16
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14713..15084
DNA (372bp) protein (124aa)
Microcompartments protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z560_9CLOT
Microcompartments protein {ECO:0000313|EMBL:CCQ98020.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
microcompartments protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_17
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15150..15428
DNA (279bp) protein (93aa)
Putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZHM0_9CLOT
Putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein {ECO:0000313|EMBL:CCQ98019.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; C
microcompartments protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_18
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15448..16242
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZI03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ98018.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_19
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16257..16544
DNA (288bp) protein (96aa)
Carbon dioxide concentrating mechanism protein CcmL n=1 Tax=Clostridium ultunense Esp RepID=M1ZLY6_9CLOT
Carbon dioxide concentrating mechanism protein CcmL {ECO:0000313|EMBL:CCQ98017.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
eutN; ethanolamine utilization protein EutN
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_17_20
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16561..18018
DNA (1458bp) protein (486aa)
adenine deaminase (EC:3.5.4.2)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4 rbh
Adenine deaminase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MLL7_ALKOO rbh
Displaying 20 items

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