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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_1
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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553..2286
DNA (1734bp) protein (578aa)
Sigma-54 dependent transcriptional regulator n=1 Tax=Clostridium intestinale URNW RepID=U2PRS8_9CLOT rbh
Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:ERK29145.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium i rbh
sigma-54 dependent transcriptional regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2733..3944
DNA (1212bp) protein (404aa)
dpaL; diaminopropionate ammonia-lyase (EC:4.3.1.15)
diaminopropionate ammonia-lyase n=1 Tax=Clostridium botulinum RepID=UPI000378A070 rbh
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:KIL08843.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;" rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3974..5167
DNA (1194bp) protein (398aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U2D4_9CLOT rbh
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:EKQ55056.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; rbh
peptidase M20
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5223..6629
DNA (1407bp) protein (469aa)
Amidohydrolase n=3 Tax=Clostridium difficile RepID=U3XIW9_CLODI rbh
Amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:CCL30295.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15. rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6841..8199
DNA (1359bp) protein (453aa)
Uracil-xanthine permease family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D957_CLODI rbh
Uracil-xanthine permease family protein {ECO:0000313|EMBL:EQF24444.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoc rbh
xanthine/uracile permease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8251..8805
DNA (555bp) protein (185aa)
xdhC2; Xanthine dehydrogenase iron-sulfur bindingsubunit XdhC2 (EC:1.17.1.4)
Carbon monoxide dehydrogenase%2C iron-sulfur-binding subunit {ECO:0000313|EMBL:CKH21204.1}; EC=1.2.99.2 {ECO:0000313|EMBL:CKH21204.1};; Xanthine dehydrogenase iron-sulfur binding subunit XdhC2 {ECO:00
(2Fe-2S)-binding protein n=1 Tax=Clostridium difficile RepID=UPI00017F5AA8
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8808..11036
DNA (2229bp) protein (743aa)
Putative xanthine dehydrogenase {ECO:0000313|EMBL:CCK94530.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CCK94530.1};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae rbh
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=7 Tax=Clostridium difficile RepID=D5S003_CLODI rbh
xanthine dehydrogenase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11040..11714
DNA (675bp) protein (225aa)
Flavin reductase n=218 Tax=Clostridium difficile RepID=D5Q3N0_CLODI rbh
iron-sulfur flavoprotein
Putative NAD(P)H-dependent FMN reductase {ECO:0000313|EMBL:CCK98470.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pepto rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11892..13247
DNA (1356bp) protein (452aa)
Xanthine permease family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DCY2_CLODI rbh
xanthine/uracile permease
Xanthine permease family protein {ECO:0000313|EMBL:EQF24435.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13441..14355
DNA (915bp) protein (305aa)
Xanthine permease n=3 Tax=Clostridium RepID=N9XYM8_9CLOT
Xanthine permease {ECO:0000313|EMBL:ENZ20370.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
uracil-xanthine permease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_11
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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14392..14847
DNA (456bp) protein (152aa)
(2Fe-2S)-binding domain protein n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3H7H7_ILYPC
(2Fe-2S)-binding domain-containing protein
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ADO82873.1}; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14865..15647
DNA (783bp) protein (261aa)
Putative FAD-binding subunit of xanthine dehydrogenase {ECO:0000313|EMBL:CCK94500.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CCK94500.1};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales rbh
FAD binding domain in molybdopterin dehydrogenase n=6 Tax=Clostridium difficile RepID=D5Q3N6_CLODI rbh
pucC2; FAD-binding subunit of xanthine dehydrogenase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15649..17952
DNA (2304bp) protein (768aa)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=7 Tax=Clostridium difficile RepID=G6B947_CLODI rbh
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein {ECO:0000313|EMBL:EHJ27465.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococc rbh
xdhA2; xanthine dehydrogenase, molybdenum binding subunit
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18374..18622
DNA (249bp) protein (83aa)
xdhA1; Xanthine dehydrogenase, molybdenum bindingsubunit (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit {ECO:0000313|EMBL:CCL22356.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CCL22356.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pe
Molybdopterin-binding domain of aldehyde dehydrogenase family protein n=1 Tax=Clostridium difficile CD206 RepID=T3GYW5_CLODI
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18680..20665
DNA (1986bp) protein (662aa)
Xanthine dehydrogenase, molybdenum binding subunit {ECO:0000313|EMBL:CCK94499.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CCK94499.1};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pe
xdhA; xanthine dehydrogenase molybdenum binding subunit (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit n=8 Tax=Clostridium difficile RepID=U3UE77_CLODI
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20676..21986
DNA (1311bp) protein (437aa)
Putative S-adenosylhomocysteine deaminase {ECO:0000313|EMBL:CCK87344.1}; EC=3.5.4.28 {ECO:0000313|EMBL:CCK87344.1};; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrept rbh
putative S-adenosylhomocysteine deaminase (EC:3.5.4.28)
Amidohydrolase family protein n=7 Tax=Clostridium difficile RepID=T2USM4_CLODI rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22016..23098
DNA (1083bp) protein (361aa)
Dihydroorotate dehydrogenase, catalytic subunit n=1 Tax=Clostridium difficile T61 RepID=U4D1V0_CLODI rbh
4Fe-4S binding domain protein {ECO:0000313|EMBL:EHJ27467.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium rbh
pyrD; dihydroorotate dehydrogenase, catalytic subunit
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_18
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23117..24697
DNA (1581bp) protein (527aa)
D-aminoacylase n=1 Tax=Clostridium intestinale URNW RepID=U2PZE3_9CLOT rbh
D-aminoacylase {ECO:0000313|EMBL:ERK29144.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;" rbh
D-aminoacylase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24702..26096
DNA (1395bp) protein (465aa)
Dihydropyrimidinase {ECO:0000313|EMBL:EQE59655.1}; EC=3.5.2.2 {ECO:0000313|EMBL:EQE59655.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostr rbh
Dihydropyrimidinase n=1 Tax=Clostridium difficile P8 RepID=T4JP18_CLODI rbh
D-hydantoinase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_20
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26126..27007
DNA (882bp) protein (294aa)
Selenium-dependent molybdenum hydroxylase system protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZKA6_9CLOT
Selenium-dependent molybdenum hydroxylase system protein {ECO:0000313|EMBL:CCQ95117.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
biotin/lipoyl attachment
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_21
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26961..27731
DNA (771bp) protein (257aa)
Xanthine and CO dehydrogenases maturation factor,XdhC/CoxF family n=1 Tax=Caloramator australicus RC3 RepID=I7LH82_9CLOT
Putative xanthine dehydrogenase accessory factor {ECO:0000313|EMBL:KAJ52063.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
putative xanthine dehydrogenase accessory factor
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_22
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27775..29151)
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clost rbh
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium ultunense Esp RepID=M1YXY2_9CLOT rbh
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_23
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29157..30230)
DNA (1074bp) protein (358aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000 rbh
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Clostridium ultunense Esp RepID=M1ZBL8_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_24
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30506..31900
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZER0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ96533.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
PAS modulated sigma54 specific transcriptional regulator, Fis family
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_25
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32093..34171
DNA (2079bp) protein (693aa)
Methyl-accepting chemotaxis protein Mcp n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYF6_CLOA9
mcp6; methyl-accepting chemotaxis protein Mcp
Methyl-accepting chemotaxis protein Mcp {ECO:0000313|EMBL:AFS77807.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATC
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34481..35719
DNA (1239bp) protein (413aa)
N-carbamoyl-L-amino-acid hydrolase n=1 Tax=Clostridium ultunense Esp RepID=M1ZE30_9CLOT rbh
N-carbamoyl-L-amino-acid hydrolase {ECO:0000313|EMBL:CCQ96534.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense E rbh
hyuC; hydantoin utilization protein C rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_27
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35797..36282
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XBT7_THEPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG81485.1}; Flags: Precursor;; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola pote
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_28
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36368..37768
DNA (1401bp) protein (467aa)
D-hydantoinase {ECO:0000313|EMBL:CCQ96535.1}; EC=3.5.2.- {ECO:0000313|EMBL:CCQ96535.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=" rbh
D-hydantoinase (EC:3.5.2.-)
D-hydantoinase n=1 Tax=Clostridium ultunense Esp RepID=M1Z0Y4_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_29
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37960..39108
DNA (1149bp) protein (383aa)
hgdB; 2-hydroxyglutaryl-CoA dehydratase subunit beta HgdB (EC:4.2.1.-)
2-hydroxyglutaryl-CoA dehydratase beta subunit HgdB {ECO:0000313|EMBL:AFS79559.1}; EC=4.2.1.- {ECO:0000313|EMBL:AFS79559.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Go rbh
2-hydroxyglutaryl-CoA dehydratase beta subunit HgdB n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B250_CLOA9 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_22_30
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39197..40159
DNA (963bp) protein (321aa)
Putative Transcriptional regulator n=1 Tax=Clostridium ultunense Esp RepID=M1ZEG4_9CLOT
Putative Transcriptional regulator {ECO:0000313|EMBL:CCQ97061.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense E
transcriptional regulator
Displaying items 1-30 of 62 in total

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