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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_1
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

443..2017
DNA (1575bp) protein (525aa)
Putative phosphotransferase system component n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RPT4_HALHG rbh
phosphotransferase system component rbh
Putative phosphotransferase system component {ECO:0000313|EMBL:ADQ13968.1}; TaxID=656519 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaer rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_2
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

2020..2856
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AMR0_SEBTE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ09634.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_3
Brachyspira pilosicoli, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2998..3720)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B44984
gntR; putative GntR family transcriptional regulator
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:CCG56242.1}; TaxID=1161918 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira pilosic
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_4
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4068..5195
DNA (1128bp) protein (376aa)
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrepto rbh
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PU22_CLOSD rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_5
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5295..6197)
DNA (903bp) protein (301aa)
Molybdenum cofactor biosynthesis protein MoaC n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RQS2_9CLOT rbh
Molybdenum cofactor biosynthesis protein MoaC {ECO:0000313|EMBL:CDF58527.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrac rbh
molybdenum cofactor biosynthesis protein MoaC/MOSC-domain-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_6
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6200..7168)
DNA (969bp) protein (323aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_012 rbh
Cyclic pyranopterin monophosphate synthase n=1 Tax=Clostridium ultunense Esp RepID=M1ZBT5_9CLOT rbh
moaA; molybdenum cofactor biosynthesis protein A
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_7
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7325..8047)
DNA (723bp) protein (241aa)
Sec-independent protein translocase protein TatC n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TLZ8_ALKMQ rbh
Sec-independent protein translocase subunit TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkal rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_8
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8106..8294)
DNA (189bp) protein (63aa)
Sec-independent protein translocase protein TatA n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MLJ6_ALKOO
sec-independent translocation protein mttA/Hcf106
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkal
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_9
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8319..8810)
DNA (492bp) protein (164aa)
Molybdopterin-guanine dinucleotide biosynthesis protein B n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKV8_ALKOO
molybdopterin-guanine dinucleotide biosynthesis protein B
Molybdopterin-guanine dinucleotide biosynthesis protein B {ECO:0000313|EMBL:ABW17775.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_10
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8810..10042)
DNA (1233bp) protein (411aa)
Molybdenum cofactor synthesis domain n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKV7_ALKOO rbh
molybdenum cofactor synthesis domain-containing protein
Molybdenum cofactor synthesis domain {ECO:0000313|EMBL:ABW17774.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremland rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_11
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10054..11076)
DNA (1023bp) protein (341aa)
Molybdopterin binding domain n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TLZ4_ALKMQ rbh
molybdopterin binding domain-containing protein
Molybdopterin binding domain {ECO:0000313|EMBL:ABR47212.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_12
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11333..11908)
DNA (576bp) protein (192aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKV4_ALKOO rbh
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ABW17771.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkal rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_13
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11927..12661)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKV3_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW17770.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_14
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12675..14960)
DNA (2286bp) protein (762aa)
Molybdopterin oxidoreductase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKV2_ALKOO rbh
molybdopterin oxidoreductase
Molybdopterin oxidoreductase {ECO:0000313|EMBL:ABW17769.1}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphil rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_15
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14973..15749)
DNA (777bp) protein (259aa)
Molybdopterin oxidoreductase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKV2_ALKOO
molybdopterin oxidoreductase
Molybdopterin oxidoreductase {ECO:0000313|EMBL:ABW17769.1}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphil
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_16
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15997..17325)
DNA (1329bp) protein (443aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKV1_ALKOO rbh
two component, sigma54 specific, Fis family transcriptional regulator rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABW17768.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilu rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_17
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17312..19180)
DNA (1869bp) protein (623aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" s rbh
Histidine kinase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKV0_ALKOO rbh
histidine kinase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_18
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19187..20197)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKU9_ALKOO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW17766.1}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus or rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_19
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20200..21345)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Bacillus sp. AP8 RepID=UPI00031BD352
arxB2; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
polyferredoxin
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_20
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21501..21680)
DNA (180bp) protein (60aa)
Sec-independent protein translocase protein TatA n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MLJ6_ALKOO
sec-independent translocation protein mttA/Hcf106
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkal
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_21
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21715..22308)
DNA (594bp) protein (198aa)
Fe-S-cluster-containing hydrogenase subunit n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A4Q4_DESDJ
Fe-S-cluster-containing hydrogenase subunit
Fe-S-cluster-containing hydrogenase subunit {ECO:0000313|EMBL:AFL98938.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfit
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_22
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22329..22991)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKV3_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW17770.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_23
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23006..25186)
DNA (2181bp) protein (727aa)
dehydrogenase n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI0003666DFD rbh
anaerobic dehydrogenase
Putative anaerobic dehydrogenase {ECO:0000313|EMBL:BAE82336.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_24
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25307..26080)
DNA (774bp) protein (258aa)
Anaerobic dehydrogenase, typically selenocysteine-containing n=2 Tax=Desulfitobacterium RepID=I4A4Q2_DESDJ
anaerobic dehydrogenase, typically selenocysteine-containing
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:AFL98936.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_25
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26438..26788
DNA (351bp) protein (117aa)
Molybdenum transport domain protein n=2 Tax=Lachnospiraceae RepID=R6GEV4_9FIRM
Molybdenum transport domain protein {ECO:0000313|EMBL:CDD98954.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="
ModE family transcriptional regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_26
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26990..27847
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002E29303
Molybdenum ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:EGD46308.1}; Flags: Precursor;; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcace
molybdenum ABC transporter periplasmic molybdate-binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_27
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27866..28540
DNA (675bp) protein (225aa)
Molybdate ABC transporter permease n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MQ73_9FIRM
Molybdate ABC transporter permease {ECO:0000313|EMBL:CDB98059.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" sour
molybdate ABC transporter, permease protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_28
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28654..29607
DNA (954bp) protein (318aa)
ABC transporter related protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TH70_9CLOT rbh
ABC transporter related protein {ECO:0000313|EMBL:EGD46310.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyro rbh
sulfate/molybdate ABC transporter ATPase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_29
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29650..30243)
DNA (594bp) protein (198aa)
mobA; molybdenum cofactor guanylyltransferase (EC:2.7.7.77)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; G
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B4U7_CLOA9
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_30
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30255..30743)
DNA (489bp) protein (163aa)
mogA; molybdopterin adenylyltransferase (EC:2.7.7.75)
Molybdopterin adenylyltransferase n=1 Tax=Clostridium ultunense Esp RepID=M1ZE50_9CLOT
Molybdopterin adenylyltransferase {ECO:0000313|EMBL:CCQ96208.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Es
Displaying items 1-30 of 68 in total

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