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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_1
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(225..1325)
DNA (1101bp) protein (367aa)
Multiple sugar ABC transporter, ATP-binding protein n=1 Tax=Caloramator australicus RC3 RepID=I7LHN1_9CLOT rbh
Multiple sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CCJ34156.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloram rbh
sugar ABC transporter ATP-binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_2
unknown

Not on your lists

comp(1306..2460)
DNA (1155bp) protein (385aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_3
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

Not on your lists

comp(2450..3691)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5QP57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ28109.1}; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
yesQ; sugar permease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_4
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3702..4541)
DNA (840bp) protein (280aa)
ABC-type sugar transport system, permease component n=3 Tax=Clostridium acetobutylicum RepID=F0K7N3_CLOAE
sugar ABC transporter permease
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:AAK78642.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_5
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4531..6303)
DNA (1773bp) protein (591aa)
ABC transporter related protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TEX6_9CLOT rbh
ABC transporter related protein {ECO:0000313|EMBL:EGD46914.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyro rbh
multidrug export ATP-binding protein/permease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_6
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6410..6682)
DNA (273bp) protein (91aa)
Putative cytoplasmic protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TEX5_9CLOT
Putative cytoplasmic protein {ECO:0000313|EMBL:EGD46913.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosol
cytoplasmic protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_7
unknown

Not on your lists

comp(6957..7178)
DNA (222bp) protein (74aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_8
unknown

Not on your lists

comp(7445..9712)
DNA (2268bp) protein (756aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_9
Bacteroides sp. CAG:927, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9801..10076)
DNA (276bp) protein (92aa)
putative deoxyribonuclease TATDN2-like; K03424 TatD DNase family protein [EC:3.1.21.-]
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:927 RepID=R5B703_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX48687.1}; TaxID=1262753 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_10
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10180..12363)
DNA (2184bp) protein (728aa)
Radical SAM domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TEX4_9CLOT rbh
Radical SAM domain protein {ECO:0000313|EMBL:EGD46912.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolve rbh
Radical SAM domain-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_11
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12958..13338)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AVN2_CLOA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS77339.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_12
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13528..14811
DNA (1284bp) protein (428aa)
Major facilitator superfamily MFS_1 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KPG9_CLOPH rbh
major facilitator transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABX43243.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_13
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

14830..15660
DNA (831bp) protein (277aa)
glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JAE6_9FIRM
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CDD47770.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_14
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15712..16173)
DNA (462bp) protein (154aa)
CheC domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZKS1_9CLOT
CheC domain protein {ECO:0000313|EMBL:CCQ95942.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
CheC-like family protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_15
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16170..16592)
DNA (423bp) protein (141aa)
Hemerythrin-like metal-binding protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B308_CLOA9
hemerythrin-like metal-binding protein
Hemerythrin-like metal-binding protein {ECO:0000313|EMBL:AFS79567.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_16
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16727..17761)
DNA (1035bp) protein (345aa)
Putative metal-dependent phosphohydrolase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CPH7_9CLOT
Putative metal-dependent phosphohydrolase {ECO:0000313|EMBL:EOD00571.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalin
metal dependent phosphohydrolase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_17
Clostridiales bacterium S7-1-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18002..18304)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D4CCBE
TrpR-like protein YerC/YecD {ECO:0000313|EMBL:KGF07941.1}; TaxID=1284708 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bact
TrpR-like protein YerC/YecD
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_18
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18393..20063)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1288971 sp rbh
formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Clostridium ultunense Esp RepID=K7RZW5_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_19
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20309..21574)
DNA (1266bp) protein (422aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC rbh
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Clostridium ultunense Esp RepID=M1ZBS1_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_20
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21593..23125)
DNA (1533bp) protein (511aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxa mide formyltransferase/IMP cyclohydrolase PurH (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Clostridium ultunense Esp RepID=M1YZB4_9CLOT rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_21
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23130..23759)
DNA (630bp) protein (210aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AU12_9CLOT
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_22
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23747..24781)
DNA (1035bp) protein (345aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth rbh
purM; Phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Clostridium ultunense Esp RepID=M1ZDE1_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_23
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25045..26388)
DNA (1344bp) protein (448aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256 rbh
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CTZ4_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_24
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26670..27155)
DNA (486bp) protein (162aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Clostridium ultunense Esp RepID=M1ZCP9_9CLOT
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
N5-carboxyaminoimidazole ribonucleotide mutase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_25
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27168..30839)
DNA (3672bp) protein (1224aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CCQ95923.1}; EC=6.3.5.3 {ECO:0000313|EMBL:CCQ95923.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac rbh
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Clostridium ultunense Esp RepID=M1ZDD7_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31136..31639)
DNA (504bp) protein (168aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium botulinum BKT015925 RepID=F4A3Q1_CLOBO
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEB76384.1}; TaxID=929506 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum BKT0
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_27
unknown

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comp(31727..32134)
DNA (408bp) protein (136aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32205..32429)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Kyoto / Type A2) RepID=C1FLN4_CLOBJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO86074.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_29
Paenibacillus sp. FSL R5-192, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32445..32885)
DNA (441bp) protein (147aa)
Membrane protein n=1 Tax=Clostridium intestinale URNW RepID=U2PR56_9CLOT
Membrane protein {ECO:0000313|EMBL:ETT31381.1}; TaxID=1226754 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-192.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_26_30
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32887..33093)
DNA (207bp) protein (69aa)
Transcriptional regulator n=3 Tax=Clostridium acetobutylicum RepID=F0K8Y3_CLOAE
transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:AAK81256.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutyli
Displaying items 1-30 of 252 in total

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