ggKbase home page

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_1
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(271..744)
DNA (474bp) protein (158aa)
Coat F domain protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U960_ETHHY
Coat protein F {ECO:0000313|EMBL:KGG80417.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
Coat F domain-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_2
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(953..2164)
DNA (1212bp) protein (404aa)
Glycosyl transferase n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E289_9FIRM rbh
Glycosyl transferase {ECO:0000313|EMBL:CCU79700.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum s rbh
glycosyl transferase group 1
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2321..3799)
DNA (1479bp) protein (493aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H rbh
lysS; Lysine-tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Clostridium ultunense Esp RepID=M1ZAS2_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3830..4306)
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=1 Tax=Clostridium ultunense Esp RepID=M1ZA89_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1288971 species="Bacteri
greA; transcription elongation factor GreA
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4462..5259)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1YW81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ94800.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_6
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5444..6412)
DNA (969bp) protein (323aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost rbh
dusB; tRNA-dihydrouridine synthase B (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=1 Tax=Clostridium ultunense Esp RepID=M1Z9I0_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6457..7230)
DNA (774bp) protein (258aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R rbh
coaX; pantothenate kinase type III (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Clostridium ultunense Esp RepID=M1Z6J1_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_8
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7250..8071)
DNA (822bp) protein (274aa)
Putative membrane protein n=1 Tax=Clostridium ultunense Esp RepID=M1YS35_9CLOT rbh
Putative membrane protein {ECO:0000313|EMBL:CCQ93365.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_9
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8319..9281)
DNA (963bp) protein (321aa)
Peptidase family T4 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AVA4_9CLOT rbh
Peptidase family T4 {ECO:0000313|EMBL:EOD01123.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensi rbh
L-aminopeptidase/D-esterase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_10
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9479..10663)
DNA (1185bp) protein (395aa)
Glutaconyl-CoA decarboxylase subunit beta {ECO:0000313|EMBL:CCQ93366.1}; EC=4.1.1.70 {ECO:0000313|EMBL:CCQ93366.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac rbh
glutaconyl-CoA decarboxylase beta subunit (EC:4.1.1.3 4.1.1.70)
Glutaconyl-CoA decarboxylase subunit beta n=1 Tax=Clostridium ultunense Esp RepID=M1Z5R2_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10691..11089)
DNA (399bp) protein (133aa)
Glutaconyl-CoA decarboxylase subunit gamma {ECO:0000313|EMBL:CCQ93367.1}; EC=4.1.1.70 {ECO:0000313|EMBL:CCQ93367.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
Glutaconyl-CoA decarboxylase subunit gamma n=1 Tax=Clostridium ultunense Esp RepID=M1ZHL7_9CLOT
biotin/lipoyl attachment domain-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11270..11635)
DNA (366bp) protein (122aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
Oxaloacetate decarboxylase gamma chain n=1 Tax=Clostridium ultunense Esp RepID=M1Z706_9CLOT
sodium pump decarboxylase subunit gamma
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_13
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11649..13193)
DNA (1545bp) protein (515aa)
Putative propionyl-CoA carboxylase beta chain {ECO:0000313|EMBL:CCQ93369.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CCQ93369.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid rbh
Putative propionyl-CoA carboxylase beta chain n=1 Tax=Clostridium ultunense Esp RepID=M1Z6J4_9CLOT rbh
AccA; acetyl-CoA carboxylase subunit alpha
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_14
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13221..13622)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1YS38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ93370.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
glyoxalase/bleomycin resistance protein/dioxygenase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_15
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13712..14647)
DNA (936bp) protein (312aa)
Putative enzyme {ECO:0000313|EMBL:CCQ93371.1}; EC=3.6.-.- {ECO:0000313|EMBL:CCQ93371.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source= rbh
Putative enzyme n=1 Tax=Clostridium ultunense Esp RepID=M1Z5R6_9CLOT rbh
LAO/AO transport system ATPase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_16
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14660..15058)
DNA (399bp) protein (133aa)
B12 binding domain of Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EOD01131.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EOD01131.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
B12 binding domain of Methylmalonyl-CoA mutase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CR33_9CLOT
cobalamin B12-binding domain-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_17
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15181..16860)
DNA (1680bp) protein (560aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWV8_9CLOT rbh
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KGG80623.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_18
unknown

Not on your lists

comp(17118..17471)
DNA (354bp) protein (118aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_19
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17535..18362)
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Acetonema longum DSM 6540 RepID=F7NHU7_9FIRM
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
protein of unknown function DUF849
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_20
CG_Wirth_01, Wirthbacteria, Bacteria

Not on your lists

comp(18359..19729)
DNA (1371bp) protein (457aa)
Acetylornithine transaminase (EC:2.6.1.11)
Aminotransferase class-III n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EFK4_AMICL rbh
yodT; hypothetical protein Tax=CG_Wirth_01 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19771..21054)
DNA (1284bp) protein (428aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F943_9CLOT rbh
Putative proton/sodium-glutamate symport protein GltT {ECO:0000313|EMBL:ERI76881.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] sym rbh
sodium:dicarboxylate symporter
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_22
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21368..23179)
DNA (1812bp) protein (604aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost rbh
ftsH3; ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium ultunense Esp RepID=M1ZG00_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_23
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23257..23793)
DNA (537bp) protein (179aa)
Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:CCQ97325.1}; EC=2.4.2.8 {ECO:0000313|EMBL:CCQ97325.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
hpt; hypoxanthine phosphoribosyltransferase Hpt (EC:2.4.2.8)
Hypoxanthine-guanine phosphoribosyltransferase n=1 Tax=Clostridium ultunense Esp RepID=M1Z394_9CLOT
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_24
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23924..25303)
DNA (1380bp) protein (460aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine rbh
tilS; tRNA(Ile)-lysidine synthase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Clostridium ultunense Esp RepID=M1ZF44_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_25
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25456..27783)
DNA (2328bp) protein (776aa)
Putative Stage II sporulation protein E,protein serine/threonine phosphatase {ECO:0000313|EMBL:CCQ97329.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CCQ97329.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clo rbh
spoIIE; stage II sporulation protein E (EC:3.1.3.16)
Putative Stage II sporulation protein E,protein serine/threonine phosphatase n=1 Tax=Clostridium ultunense Esp RepID=M1ZG04_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28073..28489)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z395_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ97330.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
RNA-binding S1 domain-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_27
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28558..28884)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZF49_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ97331.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_28
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28932..29399)
DNA (468bp) protein (156aa)
Putative Spore cortex biosynthesis protein YabQ n=1 Tax=Clostridium ultunense Esp RepID=M1ZLJ9_9CLOT
Putative Spore cortex biosynthesis protein YabQ {ECO:0000313|EMBL:CCQ97332.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
yabQ; spore cortex biosynthesis protein YabQ
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_29
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29420..29698)
DNA (279bp) protein (93aa)
Sporulation protein YabP n=1 Tax=Clostridium ultunense Esp RepID=M1ZGG3_9CLOT
Sporulation protein YabP {ECO:0000313|EMBL:CCQ97333.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
yabP; sporulation protein YabP
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_27_30
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29766..30008)
DNA (243bp) protein (81aa)
Ribosomal RNA binding protein involved in 50S recycling heat shock protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZG07_9CLOT
Ribosomal RNA binding protein involved in 50S recycling heat shock protein {ECO:0000313|EMBL:CCQ97334.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
RNA-binding S4 domain-containing protein
Displaying items 1-30 of 48 in total

View Taxonomy