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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_1
unknown

Not on your lists

1..87
DNA (87bp) protein (29aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_2
unknown

Not on your lists

84..269
DNA (186bp) protein (62aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_3
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

506..805
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JTQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ83200.1}; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium oral tax
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_4
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

817..987
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:EPR07742.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1360..1671
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45266.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae b
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_6
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1703..1873)
DNA (171bp) protein (57aa)
Spo0E like sporulation regulatory protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FJY0_9CLOT
Spo0E like sporulation regulatory protein {ECO:0000313|EMBL:EMS70616.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostrid
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_7
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

2193..2405
DNA (213bp) protein (71aa)
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor {ECO:0000255|HAMAP-Rule:MF_00015}; EC=3.4.21.88 {ECO:0000255|HAMAP-Rule:MF_00015};; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterace
LexA repressor n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=LEXA_CARHZ
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_8
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2910..3284
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZCY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ96034.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_9
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3296..4588
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1YZK6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ96035.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_10
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4590..5294
DNA (705bp) protein (235aa)
Putative pyridoxal phosphate enzyme, YggS family n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZL1_CLOA9
pyridoxal phosphate enzyme, YggS family
Putative pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:AFS78709.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (s
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5305..5742
DNA (438bp) protein (146aa)
Cell division protein SepF n=1 Tax=Clostridium ultunense Esp RepID=M1ZKU0_9CLOT
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;
sepF; cell division protein SepF
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5765..6031
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZDN2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ96038.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_13
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6044..6829
DNA (786bp) protein (262aa)
RNA-binding S4 domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZCY7_9CLOT
RNA-binding S4 domain protein {ECO:0000313|EMBL:CCQ96039.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
RNA-binding S4 domain-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_14
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6844..7377
DNA (534bp) protein (178aa)
Cell-division initiation protein DivIVA (Modular protein) n=1 Tax=Clostridium ultunense Esp RepID=M1YZL1_9CLOT
Cell-division initiation protein DivIVA (Modular protein) {ECO:0000313|EMBL:CCQ96040.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
divIVA; cell-division initiation protein DivIVA
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_15
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7429..8181
DNA (753bp) protein (251aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Clostridium ultunense Esp RepID=M1ZC20_9CLOT rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:CCQ96041.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ul rbh
3-deoxy-7-phosphoheptulonate synthase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_16
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8303..8935
DNA (633bp) protein (211aa)
Transcriptional regulator, TraR/DksA family n=1 Tax=Clostridium ultunense Esp RepID=M1ZDN5_9CLOT
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:CCQ96043.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ul
TraR/DksA family transcriptional regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_17
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9144..9599
DNA (456bp) protein (152aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
lspA; signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Clostridium ultunense Esp RepID=M1ZCZ0_9CLOT
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_18
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9609..10526
DNA (918bp) protein (306aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalin rbh
RluA family pseudouridine synthase (EC:5.4.99.23)
Pseudouridine synthase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CRJ4_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_19
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10535..11065
DNA (531bp) protein (177aa)
pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase PyrR (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Clostridium ultunense Esp RepID=M1ZC24_9CLOT
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_20
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11078..12853)
DNA (1776bp) protein (592aa)
Fibronectin-binding protein A n=1 Tax=Clostridium ultunense Esp RepID=M1ZKU2_9CLOT rbh
Fibronectin-binding protein A {ECO:0000313|EMBL:CCQ96047.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
fbpA; fibronectin-binding protein FbpA
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_21
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13034..13915
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZDN9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ96048.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
YicC-like protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_22
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

13931..14188
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Bacillus sp. AP8 RepID=UPI0002D3A2C3
hypothetical protein
UPF0296 protein Toce_1021 {ECO:0000256|HAMAP-Rule:MF_01503}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermose
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_23
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14214..14828
DNA (615bp) protein (205aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0 rbh
gmk; Guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UJC5_9FIRM rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_24
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14830..15039
DNA (210bp) protein (70aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega n=1 Tax=Clostridium ultunense Esp RepID=M1ZKU3_9CLOT
DNA-directed RNA polymerase, omega subunit
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_25
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15051..16259
DNA (1209bp) protein (403aa)
Fused 4'-phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine synthetase,FMN-binding {ECO:0000313|EMBL:CCQ96053.1}; EC=4.1.1.36 {ECO:0000313|EMBL:CCQ96053.1};; EC=6.3.2.5 {ECO:0000313 rbh
coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate cysteine ligase (EC:4.1.1.36 6.3.2.5)
Fused 4'-phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine synthetase,FMN-binding n=1 Tax=Clostridium ultunense Esp RepID=M1ZDP2_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16308..18779
DNA (2472bp) protein (824aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1288971 species="Bacteria; rbh
priA; primosome assembly protein PriA (EC:3.6.4.-)
Primosomal protein N n=1 Tax=Clostridium ultunense Esp RepID=M1ZCZ8_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_27
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18791..19273
DNA (483bp) protein (161aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
def2; peptide deformylase Def (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Clostridium ultunense Esp RepID=M1YZM6_9CLOT
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_28
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19276..20205
DNA (930bp) protein (310aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1288971 species=" rbh
fmt; methionyl-tRNA formyltransferase Fmt (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Clostridium ultunense Esp RepID=M1ZC35_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_29
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20225..20923
DNA (699bp) protein (233aa)
Putative membrane protease yugP {ECO:0000313|EMBL:CCQ96057.1}; EC=3.4.24.- {ECO:0000313|EMBL:CCQ96057.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost rbh
yugP; putative membrane protease YugP (EC:3.4.24.-)
Putative membrane protease yugP n=1 Tax=Clostridium ultunense Esp RepID=M1ZKU4_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_37_30
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20985..22328
DNA (1344bp) protein (448aa)
rsmB; ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Go rbh
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AY16_CLOA9 rbh
Displaying items 1-30 of 31 in total

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