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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_1
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..871)
DNA (870bp) protein (290aa)
Transposase n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XZK1_9FIRM
Transposase {ECO:0000313|EMBL:EHQ91975.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
transposase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_2
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(982..1338)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZKA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ95087.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
IS66 Orf2 like
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1335..1694)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZA38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ95086.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_4
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2549..4492)
DNA (1944bp) protein (648aa)
Fe-S oxidoreductase n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y3V8_9FIRM rbh
Fe-S oxidoreductase {ECO:0000313|EMBL:EHQ89496.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17 rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_5
unknown

Not on your lists

comp(4626..5528)
DNA (903bp) protein (301aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_6
Lysinibacillus odysseyi, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5515..7173)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Listeria monocytogenes serotype 4bV str. LS542 RepID=U1VVL9_LISMN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGR88971.1}; TaxID=1220589 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus odysseyi 34hs
srtT; lantibiotic transport permease / lantibiotic transport ATP-binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_7
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7403..8500
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:209 RepID=R6HKJ9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDB33851.1}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="E
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_8
unknown

Not on your lists

8500..8673
DNA (174bp) protein (58aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_9
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9017..10096)
DNA (1080bp) protein (360aa)
Transposase n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0FB87_DESDL rbh
transposase
Transposase {ECO:0000313|EMBL:AGA70290.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (st rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_10
unknown

Not on your lists

comp(10060..10353)
DNA (294bp) protein (98aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_11
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10547..11104)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B3N3_9CLOT
hypothetical protein
Tax=BJP_IG2069_Clostridiales_42_11
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_12
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11532..12230)
DNA (699bp) protein (233aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TKU1_ALKMQ
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABR46809.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_13
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12296..12676)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TVM3_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR50241.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (stra
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_14
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12687..13247)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TVM4_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR50242.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (stra
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_15
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13635..14582)
DNA (948bp) protein (316aa)
Oligopeptide transport ATP-binding protein AmiF n=1 Tax=Clostridium sp. CAG:169 RepID=R6BRI4_9CLOT rbh
Oligopeptide transport ATP-binding protein AmiF {ECO:0000313|EMBL:CDA61726.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental sample rbh
ATPase components of various ABC-type transport systems, contain duplicated ATPase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_16
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14586..15632)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3A8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDA78556.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium rbh
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_17
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15657..16607)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DL25_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDA78557.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium rbh
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_18
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16607..17557)
DNA (951bp) protein (317aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease components n=1 Tax=Clostridium sp. CAG:242 PF8_9CLOT">RepID=R6CPF8_9CLOT rbh
ABC-type dipeptide/oligopeptide/nickel transport systems permease components {ECO:0000313|EMBL:CDA78558.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos rbh
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_19
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17572..19569)
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPQ1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDA78673.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium rbh
ABC-type oligopeptide transport system, periplasmic component
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_20
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19990..20400)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BEX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61725.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_21
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20606..21961)
DNA (1356bp) protein (452aa)
RNA methyltransferase, TrmA family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MMB7_ALKOO rbh
RNA methyltransferase
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:ABW18284.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_22
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22117..22956)
DNA (840bp) protein (280aa)
UPF0246 protein HLPCO_002971 n=1 Tax=Haloplasma contractile SSD-17B RepID=U2E749_9BACT rbh
UPF0246 protein TZ02_08175 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;" rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_23
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23271..23957
DNA (687bp) protein (229aa)
Two-component system response regulator n=1 Tax=Clostridium ultunense Esp RepID=M1ZCL5_9CLOT rbh
Two-component system response regulator {ECO:0000313|EMBL:CCQ96231.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultune rbh
two-component system signal transduction response regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_24
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23947..24966
DNA (1020bp) protein (340aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s rbh
two-component system signal transduction histidine kinase (EC:2.7.13.3)
Two component sensor kinase n=1 Tax=Clostridium ultunense Esp RepID=M1Z087_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_25
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25099..25767
DNA (669bp) protein (223aa)
Uncharacterized ABC transporter ATP-binding protein TM_0352 n=1 Tax=Clostridium ultunense Esp RepID=M1ZDF9_9CLOT rbh
Uncharacterized ABC transporter ATP-binding protein TM_0352 {ECO:0000313|EMBL:CCQ96229.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source rbh
ABC transporter ATP-binding protein rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_26
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25779..28175
DNA (2397bp) protein (799aa)
ABC transporter permease protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXN5_CLOA9 rbh
ABC transporter permease protein {ECO:0000313|EMBL:AFS77547.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 rbh
ABC transporter permease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_27
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28216..30543)
DNA (2328bp) protein (776aa)
Rad3-related DNA helicase {ECO:0000313|EMBL:EMS71783.1}; EC=3.6.4.12 {ECO:0000313|EMBL:EMS71783.1};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclos rbh
Rad3-related DNA helicase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FTF3_9CLOT rbh
DNA helicase, Rad3
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_28
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30628..33102)
DNA (2475bp) protein (825aa)
Methyl-accepting chemotaxis sensory transducer n=2 Tax=Clostridium carboxidivorans P7 RepID=C6PRS3_9CLOT rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EET88116.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium rbh
methyl-accepting chemotaxis sensory transducer
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_29
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33267..35378)
DNA (2112bp) protein (704aa)
Methyl-accepting chemotaxis sensory transducer with Cache sensor n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJD4_ALKOO rbh
methyl-accepting chemotaxis sensory transducer with Cache sensor rbh
Methyl-accepting chemotaxis sensory transducer with Cache sensor {ECO:0000313|EMBL:ABW19916.1}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_42_30
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35587..35814)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MLH7_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW18091.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh
Displaying items 1-30 of 40 in total

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