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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44

Search features with annotation key words

Displaying items 1-30 of 190 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_1
Treponema sp. OMZ 838, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3..785)
DNA (783bp) protein (261aa)
peptide ABC transporter substrate-binding protein
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIW90555.1}; TaxID=1539298 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema sp. OMZ
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_2
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(787..1788)
DNA (1002bp) protein (334aa)
ABC transporter, ATP-binding protein n=3 Tax=Finegoldia magna RepID=D9PQH4_FINMA
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFL54303.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS0
oligopeptide ABC transporter ATP-binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2217..3125)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z6C6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ93133.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3115..3915)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z5W0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ93134.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3920..4417)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1YRE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ93135.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_6
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4414..4968)
DNA (555bp) protein (185aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium ultunense Esp RepID=M1Z541_9CLOT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CCQ93136.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium u
sigma-70 family RNA polymerase sigma factor
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_7
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5074..6465)
DNA (1392bp) protein (464aa)
Amino acid carrier protein n=1 Tax=Collinsella sp. CAG:398 RepID=R7ALX2_9ACTN rbh
Amino acid carrier protein {ECO:0000313|EMBL:CDD43562.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" so rbh
amino acid carrier protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_8
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6722..7228)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z6D1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ93138.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_9
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7480..9519)
DNA (2040bp) protein (680aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TLU2_ALKMQ rbh
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABR47160.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilu rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_10
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9714..11264)
DNA (1551bp) protein (517aa)
AbgT putative transporter n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJL7_ALKMQ rbh
Aminobenzoyl-glutamate transporter {ECO:0000313|EMBL:KJF27252.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;" rbh
AbgT transporter
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_11
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11455..12900)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0MZN4_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB88049.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;" rbh
flotillin
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_12
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13166..14803)
DNA (1638bp) protein (546aa)
PucR C-terminal helix-turn-helix domain protein n=2 Tax=Clostridium sordellii RepID=T0DSW8_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:KJF26719.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
sugar diacid utilization regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_13
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14946..16130)
DNA (1185bp) protein (395aa)
Amidohydrolase n=2 Tax=Fusobacterium nucleatum RepID=U7SSR1_FUSNU
N-acyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:KJF26722.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
amidohydrolase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_14
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(16160..17335)
DNA (1176bp) protein (392aa)
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V5D8_THELD rbh
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:AER65765.1}; TaxID=580340 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovi rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_15
Treponema pedis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17370..18041)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Treponema pedis str. T A4 RepID=S6A325_9SPIO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT43171.1}; TaxID=1291379 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema pedis str. T A4.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_16
Parvimonas micra, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18056..18754)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJR5_9FIRM
membrane protein
Membrane protein {ECO:0000313|EMBL:AIZ36195.1}; TaxID=33033 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas micra.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_17
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18996..19802)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A0A3_MAHA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE96937.1}; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sed
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_18
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20009..22012)
DNA (2004bp) protein (668aa)
Methyl-accepting chemotaxis sensory transducer with Cache sensor n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T7Y0_9CLOT rbh
Methyl-accepting chemotaxis sensory transducer with Cache sensor {ECO:0000313|EMBL:EGD49578.1}; Flags: Precursor;; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcacea rbh
methyl-accepting chemotaxis protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_19
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22255..23886
DNA (1632bp) protein (544aa)
Putative uncharacterized protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T7X9_9CLOT rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGD49577.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyr rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_20
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23989..25626)
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=2 Tax=Clostridium ultunense RepID=M1Z9Q9_9CLOT rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1288971 spec rbh
groEL; 60 kDa chaperonin
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_21
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25759..26040)
DNA (282bp) protein (94aa)
10 kDa chaperonin n=1 Tax=Clostridium ultunense Esp RepID=M1YVI6_9CLOT
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1288971 spec
groES; 10 kDa co-chaperonin
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_22
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26244..26939)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z906_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ94576.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_23
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27109..29064)
DNA (1956bp) protein (652aa)
Putative Uncharacterized ABC transporter permease YvcS n=1 Tax=Clostridium ultunense Esp RepID=M1ZJY9_9CLOT rbh
Putative Uncharacterized ABC transporter permease YvcS {ECO:0000313|EMBL:CCQ94577.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo rbh
ABC transporter permease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_24
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29051..29818)
DNA (768bp) protein (256aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AX72_CLOA9 rbh
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AFS77367.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 79 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_25
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30029..31099)
DNA (1071bp) protein (357aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s rbh
sensor signal transduction histidine kinase (EC:2.7.3.-)
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z9R3_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_26
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31108..31800)
DNA (693bp) protein (231aa)
Response regulator n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AX94_CLOA9 rbh
response regulator
Response regulator {ECO:0000313|EMBL:AFS77365.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KC rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_27
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31919..34105)
DNA (2187bp) protein (729aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTX6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:KDR94210.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale rbh
putative lipoprotein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_28
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34107..34844)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R5T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EIC95041.1}; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sabur
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_29
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34973..35863)
DNA (891bp) protein (297aa)
8-oxoguanine DNA glycosylase (EC:3.2.2.-)
8-oxoguanine DNA glycosylase n=1 Tax=Clostridium ultunense Esp RepID=M1Z911_9CLOT rbh
8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:CCQ94581.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_44_30
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35946..36554)
DNA (609bp) protein (203aa)
Bacterial regulatory s, tetR family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CTI3_CLOSO
DNA-binding transcriptional regulator EnvR {ECO:0000313|EMBL:CEQ11778.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostr
hypothetical protein
Displaying items 1-30 of 190 in total

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