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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_1
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(73..1293)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZAU0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ95416.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_2
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1392..2372)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZFU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ97058.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2523..3380
DNA (858bp) protein (286aa)
Putative CAAX amino terminal protease n=1 Tax=Clostridium ultunense Esp RepID=M1ZBJ7_9CLOT rbh
Putative CAAX amino terminal protease {ECO:0000313|EMBL:CCQ95394.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunens rbh
CAAX amino terminal protease family protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3749..4369
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33048.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
TetR family transcriptional regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4366..5256
DNA (891bp) protein (297aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XW33_9FIRM rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJU72855.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;" rbh
ABC transporter
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_6
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5249..6052
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SQH9_CLOC7
Uncharacterized protein {ECO:0000313|EMBL:KEZ84855.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_7
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6200..6838)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWJ1_CLOA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS77100.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_8
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6849..7274)
DNA (426bp) protein (142aa)
Flavodoxin n=1 Tax=Clostridium intestinale URNW RepID=U2PWY9_9CLOT
Flavodoxin {ECO:0000313|EMBL:ERK28334.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
flavodoxin
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_9
unknown

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comp(7325..7471)
DNA (147bp) protein (49aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_10
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7475..9628)
DNA (2154bp) protein (718aa)
FeoB2 n=2 Tax=Clostridium kluyveri RepID=A5N8L2_CLOK5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH06539.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 1 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9656..9877)
DNA (222bp) protein (74aa)
FeoA domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EGF4_9FIRM
Fe2+ transport system protein A
FeoA domain protein {ECO:0000313|EMBL:EEQ57289.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_12
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9894..10106)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GEQ6_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO37736.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_13
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10318..10608)
DNA (291bp) protein (97aa)
ABC-type uncharacterized transport system, periplasmic component n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LWI7_CLOCD
ABC transporter substrate-binding protein
ABC-type uncharacterized transport system, periplasmic component {ECO:0000313|EMBL:AEV67613.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridiu
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_14
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11089..11721)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XGB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19660.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_15
Thermanaerovibrio acidaminovorans, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(11744..14845)
DNA (3102bp) protein (1034aa)
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:ACZ19764.1}; EC=3.1.21.3 {ECO:0000313|EMBL:ACZ19764.1};; TaxID=525903 species="Bacteria; Synergistetes; Synergistia; Synergistales rbh
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B6X3_THEAS rbh
HsdR family type I site-specific deoxyribonuclease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_16
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14842..16026)
DNA (1185bp) protein (395aa)
Restriction modification system DNA specificity domain protein n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B3A6_DESCC rbh
restriction modification system DNA specificity domain-containing protein
Restriction modification system DNA specificity domain protein {ECO:0000313|EMBL:AEF95137.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_17
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16019..17035)
DNA (1017bp) protein (339aa)
Virulence protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R533_9FIRM rbh
Virulence protein {ECO:0000313|EMBL:CDF44996.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG: rbh
Virulence protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_18
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17028..18599)
DNA (1572bp) protein (524aa)
Type I restriction-modification system, M subunit n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B3A5_DESCC rbh
type I restriction-modification system, M subunit
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:AEF95136.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desu rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_19
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18604..18825)
DNA (222bp) protein (74aa)
Helix-turn-helix domain protein n=2 Tax=Firmicutes RepID=F6B3A4_DESCC
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEF95135.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carbo
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_20
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19473..21776
DNA (2304bp) protein (768aa)
Phage/plasmid primase, P4 family domain protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1X8Q9_ANEAE rbh
Phage/plasmid primase, P4 family domain protein {ECO:0000313|EMBL:ERI11335.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacill rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_21
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22050..22949
DNA (900bp) protein (300aa)
Phage-related protein n=2 Tax=Clostridium kluyveri RepID=A5N291_CLOK5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH07913.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 1 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_22
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23286..24938
DNA (1653bp) protein (551aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5N289_CLOK5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH07912.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 1 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_50_23
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25032..26042)
DNA (1011bp) protein (337aa)
Peptidoglycan-binding LysM n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MI50_ALKOO
peptidoglycan-binding LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:ABW19482.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain
Displaying 23 items

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