ggKbase home page

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56

Search features with annotation key words

Displaying items 31-52 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_31
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34356..35759)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LZT0_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS63851.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;" rbh
amino acid permease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_32
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35868..36566)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZE44_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ96549.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
aspartate racemase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_33
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(36861..37430)
DNA (570bp) protein (190aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FJ13_9FIRM
D-alanyl-D-alanine dipeptidase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_34
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37636..39663)
DNA (2028bp) protein (676aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000369EC62 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHS56698.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othin rbh
putative sigma-54 specific transcriptional regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_35
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40027..40296)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SNF0_CLOC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL53942.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain A
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_36
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(40417..41226)
DNA (810bp) protein (270aa)
Acetyltransferase GNAT family protein n=1 Tax=Haloplasma contractile SSD-17B RepID=F7PVV2_9BACT
GNAT family acetyltransferase {ECO:0000313|EMBL:ETT65984.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-237.;
GNAT family acetyltransferase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_37
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41399..43996)
DNA (2598bp) protein (866aa)
Chaperone protein ClpB n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B1H2_CLOA9 rbh
clpB2; chaperone protein ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 60 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_38
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44188..45135)
DNA (948bp) protein (316aa)
DnaJ domain protein n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N8Q9_9FIRM rbh
DnaJ domain protein {ECO:0000313|EMBL:EFI41828.1}; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 386 st rbh
heat shock protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_39
unknown

Not on your lists

comp(45254..45406)
DNA (153bp) protein (51aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_40
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45561..45956
DNA (396bp) protein (132aa)
Transcriptional regulator, XRE family n=1 Tax=Clostridium ultunense Esp RepID=M1Z590_9CLOT
Transcriptional regulator, XRE family {ECO:0000313|EMBL:CCQ98055.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunens
helix-turn-helix domain-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_41
unknown

Not on your lists

comp(46156..46305)
DNA (150bp) protein (50aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_42
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46490..46759)
DNA (270bp) protein (90aa)
Copper-sensing transcriptional repressor CsoR family protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZGU8_9CLOT
Copper-sensing transcriptional repressor CsoR family protein {ECO:0000313|EMBL:CCQ98056.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_43
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46774..46980)
DNA (207bp) protein (69aa)
Copper insertion chaperone and transporter component n=1 Tax=Clostridium ultunense Esp RepID=M1ZLZ4_9CLOT
Copper insertion chaperone and transporter component {ECO:0000313|EMBL:CCQ98057.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
heavy-metal-binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_44
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47115..49487)
DNA (2373bp) protein (791aa)
copA; copper-translocating P-type ATPase CopA (EC:3.6.3.4)
Copper transporter ATPase n=1 Tax=Clostridium ultunense Esp RepID=M1ZI37_9CLOT rbh
Copper transporter ATPase {ECO:0000313|EMBL:CCQ98058.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_45
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49703..51160)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Fusobacterium nucleatum subsp. animalis 3_1_33 RepID=D0BS27_FUSNU rbh
Sodium:proton antiporter {ECO:0000313|EMBL:EYE88099.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB
Na+/H+ antiporter NhaC
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_46
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51248..52366)
DNA (1119bp) protein (373aa)
ATP-NAD kinase family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VFN3_CLOBI rbh
ATP-NAD kinase family protein {ECO:0000313|EMBL:EQK40318.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bi rbh
ATP-NAD kinase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_47
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52382..53944)
DNA (1563bp) protein (521aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; C rbh
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Putative glycine dehydrogenase (Decarboxylating) subunit 2 n=1 Tax=Clostridium ultunense Esp RepID=M1ZE24_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_48
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53966..55369)
DNA (1404bp) protein (468aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; C rbh
Glycine dehydrogenase (Decarboxylating) alpha subunit n=1 Tax=Clostridium ultunense Esp RepID=M1ZEQ5_9CLOT rbh
glycine cleavage system P-family protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_49
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55391..56167)
DNA (777bp) protein (259aa)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Clostridium ultunense Esp RepID=M1Z9N3_9CLOT rbh
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CCQ94544.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost rbh
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_50
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56385..58097
DNA (1713bp) protein (571aa)
Response regulator receiver n=1 Tax=Clostridium ultunense Esp RepID=M1YVF2_9CLOT rbh
Response regulator receiver {ECO:0000313|EMBL:CCQ94545.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
transcriptional regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_51
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58217..58441
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZHQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ98059.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
ferrous iron transport protein A
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_52
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58493..60496
DNA (2004bp) protein (668aa)
Ferrous iron transport protein B n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q895R4_CLOTE rbh
ferrous iron transport protein B
Ferrous iron transport protein B {ECO:0000313|EMBL:AAO35776.1}; TaxID=212717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani (strain rbh
Displaying items 31-52 of 52 in total

View Taxonomy