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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(154..1761)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9C2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCX49467.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium rbh
gsiB; glutathione-binding protein GsiB
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1899..2915)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2H7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCX49468.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium rbh
oligopeptide/dipeptide ABC transporter ATPase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2915..3886)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5J5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCX49469.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium rbh
dipeptide ABC transporter substrate-binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3900..4748)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B1P8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCX49470.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium rbh
dppC-1; dipeptide ABC transporter dipeptide-binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4748..5689)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDI3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCX49471.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium rbh
diguanylate cyclase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_6
Bacillus sp. CAG:988, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5975..7333)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Bacillus sp. CAG:988 RepID=R7EYJ0_9BACI
Uncharacterized protein {ECO:0000313|EMBL:CDE07348.1}; TaxID=1262708 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; environmental samples.;" source="Bacillus sp. CAG:988.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7563..8282)
DNA (720bp) protein (240aa)
UPI0003D59648 related cluster n=1 Tax=unknown RepID=UPI0003D59648 rbh
Iron-sulfur cluster repair di-iron protein {ECO:0000313|EMBL:ETI89257.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium but rbh
nitric oxide-dependent regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_8
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8473..9555)
DNA (1083bp) protein (361aa)
Cell wall hydrolase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VMG4_CLOSH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC67839.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium su rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_9
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9818..11209)
DNA (1392bp) protein (464aa)
MATE efflux family protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFV6_ALKOO rbh
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ABW18494.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_10
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11499..11936)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BT85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20227.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_11
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11933..12427)
DNA (495bp) protein (165aa)
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BT29_9CLOT
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:EOR20228.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
sigma factor
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12607..13623)
DNA (1017bp) protein (339aa)
Choloylglycine hydrolase family protein n=4 Tax=Clostridium botulinum RepID=C1FR46_CLOBJ rbh
choloylglycine hydrolase family protein
Choloylglycine hydrolase family protein {ECO:0000313|EMBL:ACO84767.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulin rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_13
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13938..14360)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKP5_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW20377.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_14
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14494..14844)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LSI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF25631.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_15
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14912..15475)
DNA (564bp) protein (188aa)
Nitroimidazole resistance protein, putative n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKP6_ALKOO rbh
nitroimidazole resistance protein
Nitroimidazole resistance protein, putative {ECO:0000313|EMBL:ABW20378.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus o rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_16
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15758..16357)
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Clostridium ultunense Esp RepID=M1Z8U3_9CLOT rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour rbh
recombination protein RecR
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_17
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16376..16714)
DNA (339bp) protein (113aa)
Nucleoid-associated protein yaaK n=1 Tax=Clostridium ultunense Esp RepID=M1YVA6_9CLOT
Nucleoid-associated protein yaaK {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_18
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16731..18368)
DNA (1638bp) protein (546aa)
dnaX; DNA polymerase III subunit gamma/tau (EC:2.7.7.7)
DNA polymerase III, gamma and tau subunits n=1 Tax=Clostridium ultunense Esp RepID=M1Z9I7_9CLOT rbh
DNA polymerase III, gamma and tau subunits {ECO:0000313|EMBL:CCQ94494.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ult rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_19
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18986..19423)
DNA (438bp) protein (146aa)
Putative Flagellar protein FliS n=1 Tax=Clostridium ultunense Esp RepID=M1Z582_9CLOT
Putative Flagellar protein FliS {ECO:0000313|EMBL:CCQ98045.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.
flagellin-specific chaperone FliS-like protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_20
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19436..20323)
DNA (888bp) protein (296aa)
Flagellin n=1 Tax=Clostridium ultunense Esp RepID=M1ZGU1_9CLOT rbh
Flagellin {ECO:0000313|EMBL:CCQ98046.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
flagellin domain-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_21
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20310..20516)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZLZ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ98047.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_22
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20513..22870)
DNA (2358bp) protein (786aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZI27_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ98048.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_23
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23139..23585
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZHP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ98049.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_24
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23639..25648
DNA (2010bp) protein (670aa)
Methyl-accepting chemotaxis sensory transducer with Cache sensor n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJR8_ALKOO rbh
methyl-accepting chemotaxis sensory transducer with Cache sensor
Methyl-accepting chemotaxis sensory transducer with Cache sensor {ECO:0000313|EMBL:ABW20050.1}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_25
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25760..26044
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z586_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ98050.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26090..27670
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZGU5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ98051.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
ABC transporter
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_27
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27954..28634
DNA (681bp) protein (227aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002888DBD rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ50009.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp rbh
ABC transporter ATP-binding protein rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_28
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28634..31273
DNA (2640bp) protein (880aa)
Putative permease n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQD7_CLOSA rbh
Permease {ECO:0000313|EMBL:KGJ50008.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;" rbh
putative permease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_29
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31533..32696)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AN32_DESPS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAG36242.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea ps rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_30
Pyramidobacter piscolens, Pyramidobacter, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(32720..34369)
DNA (1650bp) protein (550aa)
Amidohydrolase family protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5Y2_9BACT rbh
Amidohydrolase family protein {ECO:0000313|EMBL:EFB90273.1}; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter piscole rbh
amidohydrolase 3
Displaying items 1-30 of 52 in total

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