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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_56_11

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: comp(11933..12427)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BT29_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 158.0
  • Bit_score: 294
  • Evalue 7.00e-77
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:EOR20228.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 158.0
  • Bit_score: 294
  • Evalue 9.80e-77
sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 157.0
  • Bit_score: 196
  • Evalue 5.60e-48

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Taxonomy

Clostridium sartagoforme → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 495
ATGAAGGATGGTGAGAATGTGACAGAATTTGAAGAAATATACTCCGAATATTTCAAGGATGTATACAGATATGTATTATGTCTTTCTAAAAATGAGAGTATTGCAGAGGATATAACACAAGAAACATTTTTTAAAGCATTAAAAAATATTGATAGCTTCAAAGGAAATTGTAAGATGAGTGTTTGGCTCTGCCAAATTGCTAAAAACTCATATTTTTCATATTTAAAGAAAAAACAAAACAATTTTGAAAGCATTGAAGATATAGCCGATGTTTTTGATTCTGGTTTTGAACAAATATTAGTTGACGATGAAAGTGTATTTGAAATTCATAAGATACTCCATAATTTAGAAGAACCGTATAAAGAAGTATTTACATTGCGTTTTTTTGGAGATTTATCATTTTCAAAAATAGCTGAATTGTTTGGGAAAACAGAAAGCTGGGCAAGAGTCACTTATCATCGTGCAAGAATAAAATTAAAGGAGAAGTTAATATGA
PROTEIN sequence
Length: 165
MKDGENVTEFEEIYSEYFKDVYRYVLCLSKNESIAEDITQETFFKALKNIDSFKGNCKMSVWLCQIAKNSYFSYLKKKQNNFESIEDIADVFDSGFEQILVDDESVFEIHKILHNLEEPYKEVFTLRFFGDLSFSKIAELFGKTESWARVTYHRARIKLKEKLI*