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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_1
unknown

Not on your lists

203..400
DNA (198bp) protein (66aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

629..1699
DNA (1071bp) protein (357aa)
Basic membrane protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G4R7_9FIRM rbh
Basic membrane protein {ECO:0000313|EMBL:EDR47291.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;" rbh
nucleoside-binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_3
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1764..3293
DNA (1530bp) protein (510aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HK72_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHE98172.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;" rbh
ABC transporter
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_4
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3283..4380
DNA (1098bp) protein (366aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G4R5_9FIRM rbh
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDR47289.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dore rbh
inner-membrane translocator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_5
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4374..5300
DNA (927bp) protein (309aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G4R4_9FIRM rbh
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDR47288.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dore rbh
sugar ABC transporter permease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_6
Parvimonas sp. oral taxon 110, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5316..6839
DNA (1524bp) protein (508aa)
Glycine radical enzyme, YjjI family n=1 Tax=Parvimonas sp. oral taxon 110 str. F0139 RepID=F5TCQ0_9FIRM rbh
Glycine radical enzyme, YjjI family {ECO:0000313|EMBL:EGL35950.1}; TaxID=767100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral ta rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_7
Parvimonas sp. oral taxon 110, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6832..7671
DNA (840bp) protein (280aa)
Glycine radical enzyme activase, YjjW family {ECO:0000313|EMBL:EGL35207.1}; EC=1.97.1.- {ECO:0000313|EMBL:EGL35207.1};; TaxID=767100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniph rbh
Glycine radical enzyme activase, YjjW family n=1 Tax=Parvimonas sp. oral taxon 110 str. F0139 RepID=F5TCP9_9FIRM rbh
(4Fe-4S)-binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_8
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7687..8466
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZKB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ95142.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
Uncharacterized protein involved in pigment biosynthesis
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_9
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8762..9760
DNA (999bp) protein (333aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo rbh
metN3; Methionine import ATP-binding protein MetN (EC:3.6.3.-)
DL-methionine transporter subunit ATP-binding component of ABC superfamily n=1 Tax=Clostridium ultunense Esp RepID=M1ZDJ9_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_10
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9754..10428
DNA (675bp) protein (225aa)
DL-methionine transporter subunit membrane component protein of ABC superfamily n=1 Tax=Clostridium ultunense Esp RepID=M1Z196_9CLOT rbh
DL-methionine transporter subunit membrane component protein of ABC superfamily {ECO:0000313|EMBL:CCQ96645.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C rbh
binding-protein-dependent transporters inner membrane component
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_11
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

10451..11266
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AN35_SEBTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ07411.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 /
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11297..12163
DNA (867bp) protein (289aa)
Putative D-methionine-binding lipoprotein MetQ n=1 Tax=Clostridium ultunense Esp RepID=M1ZEZ3_9CLOT rbh
Putative D-methionine-binding lipoprotein MetQ {ECO:0000313|EMBL:CCQ96648.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium rbh
NLPA lipoprotein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_13
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

12478..13125
DNA (648bp) protein (216aa)
cobalamin-binding protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000287EC72
mtbC; dimethylamine corrinoid protein MtbC Tax=GWB2_Clostridiales_37_7_curated
mtbC; dimethylamine corrinoid protein MtbC
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13141..14214
DNA (1074bp) protein (358aa)
methylcobalamin:coenzyme M methyltransferase (EC:2.1.1.-)
Uroporphyrinogen decarboxylase family protein n=5 Tax=Clostridium botulinum RepID=A7FU06_CLOB1
Uroporphyrinogen decarboxylase family protein {ECO:0000313|EMBL:KIE46199.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_15
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14226..15224
DNA (999bp) protein (333aa)
Methylcobamide:CoM methyltransferase MtaA {ECO:0000313|EMBL:KDR96021.1}; EC=2.1.1.246 {ECO:0000313|EMBL:KDR96021.1};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrep rbh
mtbA3; methylcobamide:CoM methyltransferase MtbA (EC:2.1.1.-)
uroporphyrinogen decarboxylase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289FF89 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15224..16948
DNA (1725bp) protein (575aa)
(Fe-S)-binding protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A019D rbh
Putative (Fe-S)-binding protein {ECO:0000313|EMBL:BAQ13450.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;" rbh
(Fe-S)-binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16962..17822
DNA (861bp) protein (287aa)
Uroporphyrinogen decarboxylase family protein n=1 Tax=Clostridium botulinum Af84 RepID=S8BQ58_CLOBO
uroporphyrinogen decarboxylase family protein
Putative methylcobamide:CoM methyltransferase {ECO:0000313|EMBL:CAL83035.1}; TaxID=441771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium b
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_18
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17866..19374)
DNA (1509bp) protein (503aa)
Integral membrane protein MviN n=1 Tax=Clostridium ultunense Esp RepID=M1Z4F5_9CLOT
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Es
integral membrane protein MviN
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19745..21004
DNA (1260bp) protein (420aa)
Putative diguanylate cyclase n=2 Tax=Clostridium botulinum F RepID=A7GIV0_CLOBL
diguanylate cyclase
Putative diguanylate cyclase {ECO:0000313|EMBL:ABS39338.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_20
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21053..22207)
DNA (1155bp) protein (385aa)
2-hydroxyglutaryl-CoA dehydratase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289150C
2-hydroxyglutaryl-CoA dehydratase subunit D
Tax=BJP_IG2069_Clostridiales_48_15
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_21
unknown

Not on your lists

22467..22721
DNA (255bp) protein (85aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_22
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22743..23273
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N8A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79293.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
conserved hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_23
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23287..24159
DNA (873bp) protein (291aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CKB2_9CLOT rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA77098.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source= rbh
ABC-type nitrate/sulfonate/bicarbonate transp ort system, ATPase component
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_24
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24195..25352
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N7Q9_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS79300.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;" rbh
2-hydroxyglutaryl-CoA dehydratase subunit D
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_25
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25372..26025
DNA (654bp) protein (218aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CKC2_9CLOT rbh
ABC transporter permease protein {ECO:0000313|EMBL:CDA77108.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Cl rbh
ABC transporter permease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_26
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

26431..26868
DNA (438bp) protein (146aa)
Transcriptional regulator, MerR family n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KZM1_FINMA
Copper export regulator {ECO:0000313|EMBL:CRH81424.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;
MerR family transcriptional regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_27
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26944..28131
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G7M5_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EDR45679.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;" rbh
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_28
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28201..28671)
DNA (471bp) protein (157aa)
Putative lipoprotein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EWE5_CLOSG
Putative lipoprotein {ECO:0000313|EMBL:EHN16553.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
lipoprotein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_29
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28676..29773)
DNA (1098bp) protein (366aa)
Putative permease n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KZM3_FINMA rbh
Putative permease {ECO:0000313|EMBL:KDR96281.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5 rbh
putative permease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_57_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29781..29948)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T3L9_CLOSG
Clostridium botulinum B2 450 B2_450_contig008, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22150.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
hypothetical protein
Displaying items 1-30 of 45 in total

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