ggKbase home page

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_1
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..767
DNA (765bp) protein (255aa)
purC1; phosphoribosylaminoimidazole-succinocarboxamide synthase PurC (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase PurC {ECO:0000313|EMBL:AHM56055.1}; EC=6.3.2.6 {ECO:0000313|EMBL:AHM56055.1};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostri rbh
Phosphoribosylaminoimidazolesuccinocarboxamide synthase n=2 Tax=Clostridiales RepID=E0QLI0_9FIRM rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_2
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1185..2060
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W591_DESOD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET66319.1}; Flags: Precursor;; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfospo
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_3
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2060..2749
DNA (690bp) protein (230aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W592_DESOD rbh
antimicrobial peptide ABC transporter ATPase
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:AET66320.1}; Flags: Precursor;; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcacea rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_4
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2742..2921
DNA (180bp) protein (60aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W593_DESOD
lipoprotein release ABC transporter permease
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:AET66321.1}; Flags: Precursor;; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_5
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2933..3913
DNA (981bp) protein (327aa)
Permease family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FM25_9FIRM rbh
Permease family protein {ECO:0000313|EMBL:EGW41303.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;" rbh
ABC transporter, permease protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_6
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

3933..4604
DNA (672bp) protein (224aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain id=2307266 bin=GWB2_Clostridiales_37_7 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good + rbh
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Tax=GWB2_Clostridiales_37_7_curated rbh
heme response regulator HssR
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_7
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

4604..5899
DNA (1296bp) protein (432aa)
resE; sensor histidine kinase ResE (EC:2.7.13.3)
integral membrane sensor signal transduction histidine kinase Tax=GWB2_Clostridiales_37_7_curated rbh
Integral membrane sensor signal transduction histidine kinase id=2307267 bin=GWB2_Clostridiales_37_7 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good + rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_8
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6022..7764
DNA (1743bp) protein (581aa)
ABC transporter related protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZB65_9CLOT rbh
ABC transporter related protein {ECO:0000313|EMBL:CCQ95571.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp. rbh
ABC-type multidrug transport system, ATPase and permease component
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_9
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7754..9574
DNA (1821bp) protein (607aa)
Uncharacterized ABC transporter ATP-binding protein TM_0288 n=1 Tax=Clostridium ultunense Esp RepID=M1ZKJ7_9CLOT rbh
Uncharacterized ABC transporter ATP-binding protein TM_0288 {ECO:0000313|EMBL:CCQ95572.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source rbh
ABC-type multidrug transport system, ATPase and permease component
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9940..10854
DNA (915bp) protein (305aa)
Collagen triple helix repeat protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V678_CLOPF
Collagen triple helix repeat protein {ECO:0000313|EMBL:EDT24479.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11339..12166
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZDG3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ96239.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12181..12867
DNA (687bp) protein (229aa)
Transcriptional regulatory protein SpaR n=1 Tax=Clostridium ultunense Esp RepID=M1Z096_9CLOT rbh
Transcriptional regulatory protein SpaR {ECO:0000313|EMBL:CCQ96240.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultune rbh
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_13
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12864..14285
DNA (1422bp) protein (474aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s rbh
sensor histidine kinase (EC:2.7.3.-)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium ultunense Esp RepID=M1ZCM0_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_14
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14409..14612)
DNA (204bp) protein (68aa)
Conserved protein with HTH domain n=2 Tax=Clostridium RepID=D8GIS5_CLOLD
hypothetical protein
Transcriptional regulator, XRE family {ECO:0000313|EMBL:AGY74252.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoetha
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_15
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14614..15027)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00037B8FA6
Uncharacterized protein {ECO:0000313|EMBL:ERI93661.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_16
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15355..16824)
DNA (1470bp) protein (490aa)
Polysaccharide deacetylase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9R5_9CLOT rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:EEG31830.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpento rbh
yjeA; secreted deoxyriboendonuclease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_17
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17000..17374
DNA (375bp) protein (125aa)
Transcriptional repressor, CopY family n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SQG7_CLOC7
CopY family transcriptional repressor
Tax=BJP_IG2069_Clostridiales_42_11
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_18
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17364..19217
DNA (1854bp) protein (618aa)
Peptidase M56 BlaR1 n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SQG8_CLOC7 rbh
peptidase M56 BlaR1
Tax=BJP_IG2069_Clostridiales_42_11 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19422..19862
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI000303FE1C
Uncharacterized protein {ECO:0000313|EMBL:KIE45846.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.
transcriptional regulator, MarR family
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_20
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19886..22132
DNA (2247bp) protein (749aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1YYA1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ95575.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
ABC transporter family protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_21
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22129..23985
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZB69_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ95576.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
ABC transporter, permease/ATP-binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_22
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24066..24257
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FM24_9CLOT
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_23
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24356..25159
DNA (804bp) protein (268aa)
Ribosomal protein S6 glutaminyl transferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AST7_9CLOT rbh
Ribosomal protein S6 glutaminyl transferase {ECO:0000313|EMBL:EOD00218.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisal rbh
rimK; 30S ribosomal protein S6 modification protein RimK
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_24
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25373..26089
DNA (717bp) protein (239aa)
Putative transcriptional regulatory protein WalR n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1YC64_ANEAE rbh
Putative transcriptional regulatory protein WalR {ECO:0000313|EMBL:ERI09687.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacil rbh
putative transcriptional regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_25
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26094..27518
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s rbh
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium autoethanogenum DSM 10061 RepID=U5S213_9CLOT rbh
sensory transduction histidine kinase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27651..28556
DNA (906bp) protein (302aa)
Bacitracin transport ATP-binding protein BcrA n=1 Tax=Clostridium ultunense Esp RepID=M1ZB92_9CLOT rbh
Bacitracin transport ATP-binding protein BcrA {ECO:0000313|EMBL:CCQ95043.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium rbh
bcrA; Bacitracin transport ATP-binding protein BcrA
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_27
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28556..29302
DNA (747bp) protein (249aa)
Putative Predicted transporter n=1 Tax=Clostridium ultunense Esp RepID=M1ZAU6_9CLOT
Putative Predicted transporter {ECO:0000313|EMBL:CCQ95044.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_28
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29241..30047
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1YWS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ95045.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
ABC transporter permease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_29
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

30245..31270
DNA (1026bp) protein (342aa)
lplJ; lipoate-protein ligase LplJ (EC:2.7.7.63)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobactera rbh
Lipoyltransferase and lipoate-protein ligase n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R8B9_9THEO rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_30
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31261..32103
DNA (843bp) protein (281aa)
lipA; lipoate synthase (EC:2.8.1.-)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic rbh
Lipoyl synthase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTK4_CLOSD rbh
Displaying items 1-30 of 67 in total

View Taxonomy