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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_1
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1310..2071
DNA (762bp) protein (254aa)
cwlC1; sporulation-specific N-acetylmuramoyl-L-alanine amidase CwlC (EC:3.5.1.28)
Sporulation-specific N-acetylmuramoyl-L-alanine amidase CwlC {ECO:0000313|EMBL:AFS77586.1}; EC=3.5.1.28 {ECO:0000313|EMBL:AFS77586.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostri rbh
Sporulation-specific N-acetylmuramoyl-L-alanine amidase CwlC n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYT4_CLOA9 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_2
Lysinibacillus sinduriensis, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2494..2985
DNA (492bp) protein (164aa)
nucleoside 2-deoxyribosyltransferase n=1 Tax=Kurthia massiliensis RepID=UPI000287FFFB
Nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:KGR74683.1}; TaxID=1384057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus sinduriensis
nucleoside 2-deoxyribosyltransferase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_3
Clostridium phage vB_CpeS-CP51, Caudovirales, Viruses

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comp(3433..3714)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium phage vB_CpeS-CP51 RepID=M9Q2L4_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGH27927.1}; TaxID=1305708 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Clostridium phage vB_CpeS-CP51.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_4
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4750..5370
DNA (621bp) protein (207aa)
ATPase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RT88_CLOPF
ATPase (PilT family), putative
ATPase (PilT family), putative {ECO:0000313|EMBL:AHM57560.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_5
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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5909..6466
DNA (558bp) protein (186aa)
RNA polymerase sigma factor, sigma-70 family n=5 Tax=Clostridiales RepID=D4JJ27_9FIRM
RNA polymerase sigma factor, sigma-70 family
Sigma-70 region 2 {ECO:0000313|EMBL:EFF68520.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_6
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6441..7424
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0T2I3_SYNGF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY55301.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (s
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7509..7940
DNA (432bp) protein (144aa)
Uncharacterized protein n=6 Tax=Clostridiales RepID=C7GHS9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13220.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_8
Paenibacillus sp. IHB B 3415, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8168..9289
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Paenibacillus massiliensis RepID=UPI000373BEF0
Uncharacterized protein {ECO:0000313|EMBL:KHL91583.1}; TaxID=867080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHB B 3415.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_9
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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9629..10111
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TNB8_ALKMQ
Uncharacterized protein {ECO:0000313|EMBL:KGR79039.1}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_10
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

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11121..12107
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JZJ9_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:ERJ85255.1}; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium oral tax rbh
putative MarR family transcriptional regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_11
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12109..12561
DNA (453bp) protein (151aa)
MarR family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H3A7_9CLOT
MarR family protein {ECO:0000313|EMBL:EJF39693.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
putative MarR family transcriptional regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12951..13460)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XSD7_9CLOT
Helix-turn-helix domain protein {ECO:0000313|EMBL:KIE48229.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense C
AraC family transcriptional regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_13
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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13875..14507
DNA (633bp) protein (211aa)
Methyltransferase domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CMV5_9FIRM rbh
Methyltransferase domain protein {ECO:0000313|EMBL:ERI91844.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;" rbh
Methyltransferase type 12
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_14
unknown

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14817..14969
DNA (153bp) protein (51aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_15
unknown

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14938..15159
DNA (222bp) protein (74aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_16
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15232..15900
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002D3FC96 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB89861.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;" rbh
DNA polymerase beta domain-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_17
unknown

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16506..16739
DNA (234bp) protein (78aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_18
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17085..19757
DNA (2673bp) protein (891aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour rbh
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Clostridium ultunense Esp RepID=M1ZIT1_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_19
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19744..20361
DNA (618bp) protein (206aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1288971 species="Bacteria; F
coaE; dephospho-CoA kinase CoaE (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Clostridium ultunense Esp RepID=M1ZIE5_9CLOT
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_20
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20381..21031
DNA (651bp) protein (217aa)
lytic transglycosylase-like protein (EC:3.2.1.-)
Transglycosylase SLT domain-containing protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z6D0_9CLOT
Transglycosylase SLT domain-containing protein {ECO:0000313|EMBL:CCQ98375.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_21
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21047..22783
DNA (1737bp) protein (579aa)
Putative Extracellular solute-binding protein,family 5 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHK3_9CLOT rbh
Putative Extracellular solute-binding protein,family 5 {ECO:0000313|EMBL:CCQ98376.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo rbh
appA; oligopeptide ABC transporter substrate binding protein AppA rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_22
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23040..24401
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZ03_CLOA9 rbh
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AFS77636.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_23
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24697..25947
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWN0_CLOSD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH20845.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_70_24
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26465..26983
DNA (519bp) protein (173aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1J7_9FIRM
Displaying 24 items

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