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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_14_1

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: 59..1195

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase XerD n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KBY4_CLOPA similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 376.0
  • Bit_score: 597
  • Evalue 6.80e-168
  • rbh
site-specific recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 376.0
  • Bit_score: 596
  • Evalue 4.30e-168
  • rbh
Site-specific recombinase XerD {ECO:0000313|EMBL:AGK97135.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1. similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 376.0
  • Bit_score: 596
  • Evalue 2.10e-167
  • rbh

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Taxonomy

Clostridium pasteurianum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1137
TTGAAAGTGCAGGAAGTCATATTACAGGAAAATAAAAAAGGATACATGTTACTTGATGATGGTTTACCAGTAATTCCAGTGGTTAAATATATTAAATATCTTGATAATACAGAAAAAAGTAGTAACACTCAGAAAACTTACTGCTATAGTTTAAAGCTCTATTTTGAATTTTTAAAAGAAGTAGAAAAAGATTATCGGGAAATTAATATTAACGATTTATCTGATTTTGTTGGTTGGCTAAGAAATCCTTATGAAAGTAATAAAATAGTCGGTATAATGCCTACTAAATCAAAGAGAACAGAAAGAACAGTTAATTTAATTATTTCAGCAGTTACTAATTTCTATGACTATCTATTTAGAACAGAAGAAATAAATAATGACATGATTGATAAACTTATGAAACAAATATTTATTGGGAAAAATAGGATTTATAAAGACTTTTTATATCATGTGAATAAAGATAAACCTATAAATAGGAATATTTTAAAAATTGAAGAACCAAGAAAAAAGTTAAAGGTACTTACTAAAGAAGAAGTAGAAGAAATATACACTGCAACGACAAATATAAGGGATAGTTTTTTAATTAGACTATTATTTGAAACAGGGCTAAGAATTGGAGAAGCCTTATCACTATTTATTGAAGATTTTATTTGTGATTATCAAAATGGTCATAAAATCAGGTTAGTGGATAGAGGAGAACTTGTTAATGGTTCTAAATTAAAGACAGGAGAAAGAGAAATTCATGTATCGCAAGAGTTAATGGATTTGTTTGATGACTACATGTATGATATATTAGACGATTTAGAAATAGATACTAATTTTGTATTTATTAAAATAAAAGGTGAAAAATGTGGAGAACCCATGGATTACTCTAATGTTAATTCTCTATTTAAGATGCTGGAGAAGAAAACTGGAATAAGAATTTATCCCCATCTTTTAAGACATACACATGCTACCATGTATTATAGACAGACAAAAGATATTAAGCAGGTGCAAGAAAGATTAGGTCATTCCCAAATACAAACTACTATGAATCTATATCTGCATCCTTCAGATGAGGACATAAGAAAAAGTTGGGAAATAGCACAGCCAGTCTTTAAGATAATTACTAATAAAAACGAGGAAGGTAAATTCTAA
PROTEIN sequence
Length: 379
LKVQEVILQENKKGYMLLDDGLPVIPVVKYIKYLDNTEKSSNTQKTYCYSLKLYFEFLKEVEKDYREININDLSDFVGWLRNPYESNKIVGIMPTKSKRTERTVNLIISAVTNFYDYLFRTEEINNDMIDKLMKQIFIGKNRIYKDFLYHVNKDKPINRNILKIEEPRKKLKVLTKEEVEEIYTATTNIRDSFLIRLLFETGLRIGEALSLFIEDFICDYQNGHKIRLVDRGELVNGSKLKTGEREIHVSQELMDLFDDYMYDILDDLEIDTNFVFIKIKGEKCGEPMDYSNVNSLFKMLEKKTGIRIYPHLLRHTHATMYYRQTKDIKQVQERLGHSQIQTTMNLYLHPSDEDIRKSWEIAQPVFKIITNKNEEGKF*