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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_14_32

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: comp(42559..44595)

Top 3 Functional Annotations

Value Algorithm Source
gmr; cyclic di-GMP phosphodiesterase Gmr (EC:3.1.4.52) similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 677.0
  • Bit_score: 521
  • Evalue 3.10e-145
Cyclic di-GMP phosphodiesterase Gmr {ECO:0000313|EMBL:AHM57121.1}; EC=3.1.4.52 {ECO:0000313|EMBL:AHM57121.1};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; E similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 677.0
  • Bit_score: 521
  • Evalue 1.60e-144
  • rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium intestinale URNW RepID=U2NMX2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 694.0
  • Bit_score: 475
  • Evalue 7.00e-131
  • rbh

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Taxonomy

Eubacterium acidaminophilum → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2037
ATGGTGAGAGTTGGGAAAAGAGATTTAAAGGATTTATTAAATTTAAAAGATTTGCTACCTAAGAAAGAAGCTCTAAGGATTTCTATTATATATTTTATATTAAGCTTTATTTGGATACAATTTTCGGATGAATTCTTTTATAAGATTATAGGAAATACAAGTAAGTACAAGGATATTCAGAAATATAAGGGATGGACCTTTATATTTTTAACGACTGTTTTAATTTATTTTTCAATATATGAAAGATTAAAAAAGGCTAAAGATATGGGAATTGCATTACATAAAAGCATGGAAGAATTATCTGCTACAACAGAAGGACTTCTAACTACTCAAGAAAAATTGAATAGAGAACAAATATTATCTGAGAATATATTTAAAAATTCTACATTAATAATTTTCACTTGGAATTTAGATGGCAGCATAATAAGTTTTAATCCTTATGGAGAAAAGGTTACAGGATATAAGGAAGAGGAGATAATAGGGAAATCTTGGATTGACTTATTTTTATATGAGGATGAGAAGCCAAAGGTAAAAGGATTAGTAGAATACCTTAAGAGTGGAAGGTCTATAAAGAACAGTATAGGAGATGTATGGAGATCTAAGGACAATAGAATTATTGAACTTATATGGACAGACTCTCCCATATACGATGAAGATGGAAATGTGACTCAGATAATTTCTTTTGGGACGGATATAACAGACCATAAGAAACTTTTGAGAAGGCTGAATGAACTAGCATACTACGATACCTTAACTGGACTTCCCAATAGGATTATGCTAAAAAATGAGGCGGGTAAATTAATAAAAGATGCGAAACTTAACAATATCAGATTAGGTTTTCTATATATAGATATAGACAACTTTACACAGATAAATGATACTTTAGGTCATGATGCAGGAGATGATTTTTTAATTCATTTGGCTAAGATATTAAAAGAAGAAAATAAAGATGGAAATATTTTAGCTAAACTAAGTGAGGATGAATATGCTATTATTCTATATAATGTAGAAGATAGAGATGATATAATTAGAAAGACAGAGTATATTCTAAAGGAAATTAGGAAACCGTGGTGCATTGATAAAGAGGAGTTTATTATATCAGCAAGTATAGGAATATCTATTTTTCCTCATAATGGAGATAATTACTCTGATCTAATGAGATCAGCCAATATGGCAATGTATAATATAAAGAGCAAAGGTAAAAACGGATATGCATTCTATGAGGCGGAAATGGGTAAGAGGATAGCTGATAATACCTTTATGATCAATCAAGTAAGAAGGGCTATTGAAGAGGAGCAATTTACTTTACATTATCAACCAGTTATTAATATGGAAGACAATACAATATATGGAGCAGAATGTTTAATTAGATGGTATCATCCAGAAAAGGGCTATATCCCACCAATGGATTATATACCTTTAATAGAAGAGACAGGTCAAATATTTGATGTTACATCATTGATTTTAAAAATGGCATTTAATCAAAAGAAGCTCTTAAATGAAAAAGGATATTCATACCTTAAGTTATCGGTGAATATTTCAAATAAATCTCTTATAAAAGGTGGTTTAGACAATGAAATAGTTAAACTTTTAGAGGAATATAAAATAAAACCTGAAGAAATTACAATAGAAATTACAGAAACATCTTTCATGGGAAATTTAGAGGGCTGTATTTATACTTTAACAAAATTAGAAGAATTAGGCATAGAAATAGCACTAGACGATTTTGGAACAGGTTATTCTTCTTTAGCACAATTAAAGAGACTTCCTATTCATAATGTAAAAATGGATCAAGAATTCATTAAGACTATGAAGAAGAATAGTGAAGAAGAGGTTGTGGTCAAATCCATAATAGAGCTAGCTCATACATTAGGACTAAAGATAATAGCAGAGGGTATAGAGACTAAGGAACAGCAAGAAATACTTTTAGAAAGTAAATGTGATTTGGGTCAAGGGTATTATCTCGGTAAACCTATGAATGCAGAATCATTCCAAAATATGTTAATGATGAATAAAAGGGTGAATATAAATGAGTAA
PROTEIN sequence
Length: 679
MVRVGKRDLKDLLNLKDLLPKKEALRISIIYFILSFIWIQFSDEFFYKIIGNTSKYKDIQKYKGWTFIFLTTVLIYFSIYERLKKAKDMGIALHKSMEELSATTEGLLTTQEKLNREQILSENIFKNSTLIIFTWNLDGSIISFNPYGEKVTGYKEEEIIGKSWIDLFLYEDEKPKVKGLVEYLKSGRSIKNSIGDVWRSKDNRIIELIWTDSPIYDEDGNVTQIISFGTDITDHKKLLRRLNELAYYDTLTGLPNRIMLKNEAGKLIKDAKLNNIRLGFLYIDIDNFTQINDTLGHDAGDDFLIHLAKILKEENKDGNILAKLSEDEYAIILYNVEDRDDIIRKTEYILKEIRKPWCIDKEEFIISASIGISIFPHNGDNYSDLMRSANMAMYNIKSKGKNGYAFYEAEMGKRIADNTFMINQVRRAIEEEQFTLHYQPVINMEDNTIYGAECLIRWYHPEKGYIPPMDYIPLIEETGQIFDVTSLILKMAFNQKKLLNEKGYSYLKLSVNISNKSLIKGGLDNEIVKLLEEYKIKPEEITIEITETSFMGNLEGCIYTLTKLEELGIEIALDDFGTGYSSLAQLKRLPIHNVKMDQEFIKTMKKNSEEEVVVKSIIELAHTLGLKIIAEGIETKEQQEILLESKCDLGQGYYLGKPMNAESFQNMLMMNKRVNINE*