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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16_9

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: comp(7933..8499)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor 70, ECF30-type n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2S5_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 173.0
  • Bit_score: 198
  • Evalue 6.00e-48
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:KGK85817.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 177.0
  • Bit_score: 227
  • Evalue 1.70e-56
RNA polymerase sigma factor, sigma-70 family protein similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 167.0
  • Bit_score: 205
  • Evalue 1.10e-50

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Taxonomy

Clostridium sp. HMP27 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 567
ATGAACTTTTTTAATGGTACAATACTCTTATATAGAGATAGGGGTGAGGAAGTGGAGGAAAAACTACTAATCAAGCAAGCAAAAAATGGGGATAAAGAATCCTTGCTGCAACTAGTTATGGCTCAAAAAACAGATTACTATAAATTAGCCTATGTTTATATGAAGAATGAAGACGATGCTTTAGATGCAATGCAAGACATGATAGTCATACTATATGAAAATATACATAAACTCAAGAAAGATGACGCATTTTATAGTTGGAGTAAGACCATATTGGTTAACTCTTGTAAAAGTATATTGAAAAAGAAAAAGAAGCTTACTTCCTTAGAAGATATAAAGGAAGAAGGTATTTATGAAATCGATGAAAATCCAGAGGATAAGATAGTATTAGAAAAATACTTATCTAACCTAAGTCCTAATCATCAGGAAGTCATTAAATTAAGATATTTTCTAGACCTTGACTATGAAACCATAGGACAAATACTTAAAGTTCCTCTTGGCACAGTAAAGTCTAGAATAAGCATAGCTATGAGAAATTTAAGAGAATCCATGGAAAGGATGATATAA
PROTEIN sequence
Length: 189
MNFFNGTILLYRDRGEEVEEKLLIKQAKNGDKESLLQLVMAQKTDYYKLAYVYMKNEDDALDAMQDMIVILYENIHKLKKDDAFYSWSKTILVNSCKSILKKKKKLTSLEDIKEEGIYEIDENPEDKIVLEKYLSNLSPNHQEVIKLRYFLDLDYETIGQILKVPLGTVKSRISIAMRNLRESMERMI*