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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16_1
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1065)
DNA (1065bp) protein (355aa)
Peptidoglycan-binding LysM n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MI50_ALKOO rbh
peptidoglycan-binding LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:ABW19482.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16_2
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1159..2058)
DNA (900bp) protein (300aa)
Putative Fe-S oxidoreductase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AVG4_9CLOT rbh
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:EOD01193.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kirit rbh
radical SAM domain-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16_3
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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2267..2800
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KA15_HALHC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB41836.1}; Flags: Precursor;; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Haloba
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2806..3513)
DNA (708bp) protein (236aa)
Putative metal-dependent hydrolase n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YV23_DACSA
Putative metal-dependent hydrolase {ECO:0000313|EMBL:KCZ72791.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanop
metal-dependent hydrolase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16_5
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(3676..4737)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LWP9_TEPAE rbh
Uncharacterized protein {ECO:0000313|EMBL:CDI40493.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaer rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16_6
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(4724..5290)
DNA (567bp) protein (189aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LWP8_TEPAE
RNA polymerase, sigma-24 subunit, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CDI40492.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobact
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16_7
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5634..6596
DNA (963bp) protein (321aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRH1_CLOPH rbh
excinuclease ABC subunit C
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:ABX42045.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans ( rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16_8
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6616..7932)
DNA (1317bp) protein (439aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FQN4_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGK85816.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;" rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16_9
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7933..8499)
DNA (567bp) protein (189aa)
RNA polymerase sigma factor 70, ECF30-type n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2S5_CLOA9
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:KGK85817.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
RNA polymerase sigma factor, sigma-70 family protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8875..9726
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWB3_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EEQ62307.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;" rbh
pentapeptide repeat-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16_11
Oceanobacillus picturae, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10132..11544)
DNA (1413bp) protein (471aa)
membrane dipeptidase (EC:3.4.13.19)
hypothetical protein n=1 Tax=Bacillus fordii RepID=UPI00035E5568 rbh
Putative metal-dependent hydrolase of the TIM-barrel fold protein {ECO:0000313|EMBL:CDO03540.1}; TaxID=171693 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source= rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11744..12673)
DNA (930bp) protein (310aa)
Putative murein peptide carboxypeptidase {ECO:0000313|EMBL:CCQ93920.1}; EC=3.4.16.- {ECO:0000313|EMBL:CCQ93920.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace rbh
Putative murein peptide carboxypeptidase n=1 Tax=Clostridium ultunense Esp RepID=M1YTN2_9CLOT rbh
peptidase U61, LD-carboxypeptidase A
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16_13
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12697..13236)
DNA (540bp) protein (180aa)
Nucleoside recognition domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIV5_ALKOO
Spore maturation protein {ECO:0000313|EMBL:KJF27436.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
nucleoside recognition domain-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_16_14
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13259..13861)
DNA (603bp) protein (201aa)
Nucleoside recognition domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIV6_ALKOO
nucleoside recognition domain-containing protein
Nucleoside recognition domain protein {ECO:0000313|EMBL:ABW19738.1}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="A
Displaying 14 items

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