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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_25_60

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: comp(59407..61200)

Top 3 Functional Annotations

Value Algorithm Source
PAS modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEC5_ALKOO similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 586.0
  • Bit_score: 527
  • Evalue 2.30e-146
  • rbh
PAS modulated sigma54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 586.0
  • Bit_score: 527
  • Evalue 6.60e-147
PAS modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABW17596.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus. similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 586.0
  • Bit_score: 527
  • Evalue 3.30e-146
  • rbh

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Taxonomy

Alkaliphilus oremlandii → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1794
ATGGCTGAATATTATACTGCAGATTTTAAGAACATTGCTGATATTATGAATGAAGATATTATATTTGCAGAGGAATCAATATCTATAGAGTCGGCCCTAAGAGAAATGCTTATAAGCTCCAGATACGAGATTGTAATAGTTAAAGAACTTAAAAATAAGGCTGATTATAACAATGCTTTAGGGATTATTACAATTGAAGATATAGGGAAATTAGTTAAGAAGGAGATAAATCTTAAAGACAAGGTTGGAAATTGGATAAAGGGTGATGTAACTGGTATCAATGTAGAGGAAAGCATAAGGACGTCAAAGCTCCTTATGAAGGAAAAAGGTGTAGAAACATTGCTGGTTTTAAGGGAGGAAAAAATAGTAGGAATATTGACACCCTTGGAATTGTTCAGACATCAGGATTTCCAAAGAGATGAAATAGAGCTTCAGCTAAGGCTGATATTAGGTAATCTTCATGAAGCAGTATGTGTCATAAATACTTCTGGCATAGTTACATTTTGGAATGCTAGTTCTGAAAAATTATATGGTATAGAGGCAAATGAAATAGTAGGATCTCACATAGAAAAATTCTTTCCTAATGCTTTGCTTATAAGGGTTCTGAAGGAGAAAAGAACTTTCCAAAACTTAAAATATAAGCCTAAGGATGAATCAGATGTAATAATATCTGCTACCCCCCTTATATATAAAGGGGAACTAATAGGAGCAGTTTCTACGGATAGAGATCTTAATGAAATCACCAATTTATATATGGAATTAGATAGAGAAAAGACAAAGGTGGAAATCTTAAAGCAACAAATGAAGGAAATAACTCAGGATAAATATTTCTTTGGTAAGATTATCGGTAAGTCTAAGGCCTTAGTAGATGCCATGACTATAGCTAAACAAGTAGCTAAAACAGATGCAAGCGTATTAATCACTGGTGAAAGCGGAACTGGAAAAGAAGTATTTTCAAGGGCTATACATCAGGAAAGTGATAGAAAAGGAGATTTTATTCCAGTTAATTGTAGTGCTATACCTTCAAATCTTTTAGAATCTGAATTATTCGGATATGTGGAGGGGGCCTTTACAGGTGCTTATAAGAAAGGAAGACCAGGAAAGTTTGAACTAGCCAATGGTGGAACTTTATTTTTAGACGAGATTGGTGATATGCCTTTACTTATGCAGGCAAAGCTACTTAGAGTATTACAAGATGGAATCGTGTATAGAGTAGGAAGCAGTAAATCTATAAAGGTAGATGCAAGGATAATAGCTGCAACAAATAAAGACTTGCAGCAACTTATGGAGGAAGGTAAATTTAGAGAGGACCTTTATTATAGATTAAATGTGGTATCCATACAAATACCTCCGCTTAGAGAACGAAAGGAAGATATACCAGAGCTTATAAATAATTTTATTGAAGAATTCTCAGAGAAAAATAATAAAGGAAAGATAGATATATCTCCAGATGCCATGAAGATACTGTCAGACTATCATTGGAGAGGTAATATCAGGGAATTAAAAAACACTATTGAAAGATTAGTAATTTTATCTAAGAATAATATAATTGAGAGTAATGATATACCTGCAGAAATAATAAGCAGTACAAATATGTCTCCTTTTATAAATTTGGATATAGACAATTCCTTTGATTTAAAGAATGCTGTAGAGGAATTTGAAAAGAATATAATTATAAATGCTTTAGCCACAGTAAAAGGTAATAAAGTTCAAGCAGCAGAATTACTGAATATAAAAAGATCTACACTATATTATAAATTAGACTTATACAATTTAACTGAATATTTTTCATAA
PROTEIN sequence
Length: 598
MAEYYTADFKNIADIMNEDIIFAEESISIESALREMLISSRYEIVIVKELKNKADYNNALGIITIEDIGKLVKKEINLKDKVGNWIKGDVTGINVEESIRTSKLLMKEKGVETLLVLREEKIVGILTPLELFRHQDFQRDEIELQLRLILGNLHEAVCVINTSGIVTFWNASSEKLYGIEANEIVGSHIEKFFPNALLIRVLKEKRTFQNLKYKPKDESDVIISATPLIYKGELIGAVSTDRDLNEITNLYMELDREKTKVEILKQQMKEITQDKYFFGKIIGKSKALVDAMTIAKQVAKTDASVLITGESGTGKEVFSRAIHQESDRKGDFIPVNCSAIPSNLLESELFGYVEGAFTGAYKKGRPGKFELANGGTLFLDEIGDMPLLMQAKLLRVLQDGIVYRVGSSKSIKVDARIIAATNKDLQQLMEEGKFREDLYYRLNVVSIQIPPLRERKEDIPELINNFIEEFSEKNNKGKIDISPDAMKILSDYHWRGNIRELKNTIERLVILSKNNIIESNDIPAEIISSTNMSPFINLDIDNSFDLKNAVEEFEKNIIINALATVKGNKVQAAELLNIKRSTLYYKLDLYNLTEYFS*