ggKbase home page

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_5

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: comp(2786..3667)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B3F5_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 291.0
  • Bit_score: 411
  • Evalue 7.00e-112
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 291.0
  • Bit_score: 411
  • Evalue 2.00e-112
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AFS79707.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 291.0
  • Bit_score: 411
  • Evalue 9.80e-112
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gottschalkia acidurici → Gottschalkia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 882
ATGTCTATTAGGTTAGAACTTTATAAAATATTTGATAAGGTAGCAAGATGTCAAAGTTTTTCCAAGGCTGCTAAGGAATTATACATGACGCAGCCTGCCGTAAGCCAAGCTATAATGCAACTAGAAGATGAACTGAAAATTAGACTTTTTACCCGTACACCGAGAGGAGTAATACTTACAAATGAGGGAAAAATGCTGTTTGAATATACTAATTCTGCAATTAGTTTATTAGACACAGGTGAAAAAAAGATAAAGGAGTCTAGAGATTTAAAAGAGGGAGAGTTAAAAATTGGAGTTAGTGATACAATTTCTAGATATTATTTATTGCCATATCTAGAAAAGTTTCATAAATCATATCCTAATATTAAGTTGAAAATAATTAACCGTACTACAGAAGAACTTTGTAATTTGATAAAATCAGGTGAAATAGATATTGGAATATGTAATCTACCAGTAAAGGATAACTCGTTAGATATAAGAAAGTGTAAAGATATACAAGATATTTTTGTATTTGGTGAGAAATATAAAGATATGATTTCAAAGACCATTACTTATGAAGAGTTATTAAACTATCCTCTAATATTTTTAGATAATAGATCAAGATCAAGACAGTATGTAGAAGGCTATCTATTTTCCAAGGGAATAAAAGTAATTCCAGAAATTGAACTAGGTTCTCATGATTTACTTCTAGAATTTGCTAAAATAGGATTGGGACTGGCTTGTGTAGTTAGAGAATTTTCAGAGGATTATCTATATGGAGGGTGTCTCTATGAGGTTAATCTTTTAGAAGATATTCCTAAAAGGGGTATTGGAATTTGTTCGTTAAAAGGAGTTTCTCTATCCCCTTCATCAGAAAAGTTTGTAGAGTATTTAGTGAAATAA
PROTEIN sequence
Length: 294
MSIRLELYKIFDKVARCQSFSKAAKELYMTQPAVSQAIMQLEDELKIRLFTRTPRGVILTNEGKMLFEYTNSAISLLDTGEKKIKESRDLKEGELKIGVSDTISRYYLLPYLEKFHKSYPNIKLKIINRTTEELCNLIKSGEIDIGICNLPVKDNSLDIRKCKDIQDIFVFGEKYKDMISKTITYEELLNYPLIFLDNRSRSRQYVEGYLFSKGIKVIPEIELGSHDLLLEFAKIGLGLACVVREFSEDYLYGGCLYEVNLLEDIPKRGIGICSLKGVSLSPSSEKFVEYLVK*