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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

82..1059
DNA (978bp) protein (326aa)
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:EES51247.1}; EC=1.4.1.16 {ECO:0000313|EMBL:EES51247.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid rbh
meso-diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UYY7_CLOBO rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1159..1410)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97764.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1495..2286)
DNA (792bp) protein (264aa)
Heat shock protein DnaJ domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z792_9CLOT rbh
Heat shock protein DnaJ domain protein {ECO:0000313|EMBL:CCQ93599.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunen rbh
heat shock protein DnaJ domain-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2322..2714)
DNA (393bp) protein (131aa)
Zn-finger containing protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z7Q2_9CLOT
Zn-finger containing protein {ECO:0000313|EMBL:CCQ93598.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
Zn-finger containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_5
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2786..3667)
DNA (882bp) protein (294aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B3F5_CLOA9 rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AFS79707.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3780..4970
DNA (1191bp) protein (397aa)
Conserved protein n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q899L8_CLOTE rbh
Gamma-glutamyl ligase family protein {ECO:0000313|EMBL:KIE45224.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentine rbh
F420-0--gamma-glutamyl ligase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5142..7232
DNA (2091bp) protein (697aa)
Putative Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium ultunense Esp RepID=M1ZB47_9CLOT
Putative Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:CCQ95551.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
methyl-accepting chemotaxis protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_8
Acholeplasma brassicae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(7372..9216)
DNA (1845bp) protein (615aa)
Cadmium-translocating P-type ATPase n=1 Tax=Acholeplasma brassicae RepID=U4KMW6_9MOLU rbh
cadA; Cadmium-translocating P-type ATPase
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:CCV65511.1}; TaxID=61635 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma b rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_9
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9231..9452)
DNA (222bp) protein (74aa)
Heavy metal-associated domain protein n=9 Tax=Bacteria RepID=C2KX99_9FIRM
Cation-transporting P family ATPase
Uncharacterized protein {ECO:0000313|EMBL:EGF85767.1}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M34
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_10
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9585..9956)
DNA (372bp) protein (124aa)
Transcriptional regulator, ArsR family n=4 Tax=Bacteria RepID=C5NY70_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGF85768.1}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M34
HTH transcriptional regulator, ArsR
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_11
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10117..10710)
DNA (594bp) protein (198aa)
Putative manganese efflux pump MntP n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B0F8_CLOA9 rbh
hypothetical protein
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATC rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_12
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10951..11223)
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TSI7_ALKMQ
Uncharacterized protein {ECO:0000313|EMBL:KJF27397.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_13
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11256..12617)
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TSI8_ALKMQ rbh
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ABR49156.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (s rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_14
unknown

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comp(13037..14083)
DNA (1047bp) protein (349aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_15
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(14426..15385)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N6L2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY50775.1}; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_16
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15399..16529)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N5X9_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS78709.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;" rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_17
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16523..17794)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IZU7_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS24467.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;" rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_18
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17857..18045
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MN12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72504.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_19
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

18882..19391
DNA (510bp) protein (170aa)
Tax=BJP_IG2158_OD1_28_51
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_20
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19411..22401
DNA (2991bp) protein (997aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2ABZ6_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ21944.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.; rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_21
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22398..23051
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A7A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ21945.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23239..24714)
DNA (1476bp) protein (492aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UT00_CLOBO rbh
Uncharacterized protein {ECO:0000313|EMBL:KEH96793.1}; TaxID=1443125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. BKT rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25372..27273)
DNA (1902bp) protein (634aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UT01_CLOBO rbh
Uncharacterized protein {ECO:0000313|EMBL:KEH96794.1}; TaxID=1443125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. BKT rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_24
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27275..28963)
DNA (1689bp) protein (563aa)
Putative transposon Tn7 transposition protein TnsC n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UT02_CLOBO rbh
putative transposon Tn7 transposition protein TnsC
Putative transposon Tn7 transposition protein TnsC {ECO:0000313|EMBL:AKA71487.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28950..31115)
DNA (2166bp) protein (722aa)
Transposase protein B n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JER7_CLOBU rbh
Transposase {ECO:0000313|EMBL:KEI96833.1}; TaxID=1379740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum A2B3 87.;" rbh
transposase protein B
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_26
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31112..31960)
DNA (849bp) protein (283aa)
Transposase protein A n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JG34_CLOBU rbh
transposase protein A
Transposase protein A {ECO:0000313|EMBL:AKA71485.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;" rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_27
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32121..33947)
DNA (1827bp) protein (609aa)
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000313|EMBL:CBH20624 rbh
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PW09_CLOSD rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_28
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34074..34922)
DNA (849bp) protein (283aa)
Cytochrome c-type biogenesis protein CcsB n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GX03_9FIRM rbh
Cytochrome C biogenesis protein ResC {ECO:0000313|EMBL:KJF26773.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;" rbh
cytochrome c assembly protein rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_29
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34924..36222)
DNA (1299bp) protein (433aa)
ResB-like protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GX04_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:KJF26774.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;" rbh
ResB family protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_30
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36270..37466)
DNA (1197bp) protein (399aa)
Nitrite reductase (EC:1.7.2.2)
Cytochrome c-552 {ECO:0000256|SAAS:SAAS00233541}; EC=1.-.-.- {ECO:0000256|SAAS:SAAS00275652};; EC=1.7.2.2 {ECO:0000256|SAAS:SAAS00233490};; Flags: Precursor;; TaxID=525919 species="Bacteria; Firmicute rbh
Nitrite reductase (Cytochrome ammonia-forming) n=1 Tax=Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) RepID=C7RGG5_ANAPD rbh
Displaying items 1-30 of 79 in total

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