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NECEvent2014_3_5_scaffold_233

Alias: 173_003_scaffold_233

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_233_1
unknown

Not on your lists

366..515
DNA (150bp) protein (50aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_233_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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709..2619
DNA (1911bp) protein (637aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JF47_CLOBU rbh
thrS2; threonyl-tRNA synthetase
NECEvent2014_3_5_scaffold_233_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2740..3588)
DNA (849bp) protein (283aa)
Pentapeptide repeat family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J4U1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91852.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
pentapeptide repeat-containing protein
NECEvent2014_3_5_scaffold_233_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3833..4159
DNA (327bp) protein (109aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R0N3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83999.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_5_scaffold_233_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4321..5169)
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0A799_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84051.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transcriptional regulator
NECEvent2014_3_5_scaffold_233_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5315..6172
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AJL1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84035.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
cell division protein FtsQ
NECEvent2014_3_5_scaffold_233_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6266..7966
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXF7_CLOBU rbh
ATPase component of general energizing module of ECF transporter {ECO:0000313|EMBL:KJZ84031.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
cobalt/nickel ABC transporter ATP-binding protein
NECEvent2014_3_5_scaffold_233_8
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7953..8771
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXZ9_CLOBU rbh
Transmembrane component of energizing module of methylthioadenosine ECF transporter {ECO:0000313|EMBL:KJZ87790.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
cobalt transporter
NECEvent2014_3_5_scaffold_233_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8781..9563
DNA (783bp) protein (261aa)
PHP domain (EC:3.1.3.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHQ8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84038.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_5_scaffold_233_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9797..15883
DNA (6087bp) protein (2029aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A794_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32303.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_233_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16004..18133
DNA (2130bp) protein (710aa)
Surface protein PspA n=2 Tax=Clostridium butyricum RepID=M8JDT6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91843.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
glycoside hydrolase family 3 protein
NECEvent2014_3_5_scaffold_233_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18442..20460
DNA (2019bp) protein (673aa)
Probable potassium transport system protein kup n=2 Tax=Clostridium butyricum RepID=M8J4V4_CLOBU rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
potassium transporter
NECEvent2014_3_5_scaffold_233_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21032..22258
DNA (1227bp) protein (409aa)
Serine/threonine transporter SstT n=2 Tax=Clostridium butyricum RepID=B1R0P2_CLOBU rbh
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=1523154 species="Bacteria;
Na+/serine symporter
NECEvent2014_3_5_scaffold_233_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22527..23507
DNA (981bp) protein (327aa)
L-fuco-beta-pyranose dehydrogenase {ECO:0000313|EMBL:KJZ84011.1}; EC=1.1.1.122 {ECO:0000313|EMBL:KJZ84011.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
UPI0003D5A2C5 related cluster n=1 Tax=unknown RepID=UPI0003D5A2C5 rbh
aldo/keto reductase
NECEvent2014_3_5_scaffold_233_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23566..24570)
DNA (1005bp) protein (335aa)
Helix-turn-helix domain-containing protein n=2 Tax=Clostridium butyricum RepID=M8JDU3_CLOBU rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:KJZ84042.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
hypothetical protein
NECEvent2014_3_5_scaffold_233_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24842..25792
DNA (951bp) protein (317aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JF63_CLOBU rbh
Ferrichrome-binding periplasmic protein {ECO:0000313|EMBL:KJZ84023.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
putative secreted protein
NECEvent2014_3_5_scaffold_233_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25779..26771
DNA (993bp) protein (331aa)
UPI0003D61302 related cluster n=1 Tax=unknown RepID=UPI0003D61302 rbh
Ferrichrome ABC transporter permease {ECO:0000313|EMBL:KHD14589.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
putative membrane protein
NECEvent2014_3_5_scaffold_233_18
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26771..27778
DNA (1008bp) protein (336aa)
UPI0003D626BE related cluster n=1 Tax=unknown RepID=UPI0003D626BE rbh
ABC-type Fe3+-siderophore transport system, permease 2 component {ECO:0000313|EMBL:KJZ87777.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
transport system permease
NECEvent2014_3_5_scaffold_233_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27781..28575
DNA (795bp) protein (265aa)
fhuC; Iron(3+)-hydroxamate import ATP-binding protein FhuC (EC:3.6.3.34)
UPI0003A1ABBD related cluster n=1 Tax=unknown RepID=UPI0003A1ABBD rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ93310.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_3_5_scaffold_233_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28572..29849
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A787_CLOBU rbh
Putative ABC transporter, permease protein {ECO:0000313|EMBL:KJZ84014.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
major facilitator superfamily transporter
NECEvent2014_3_5_scaffold_233_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29883..30683)
DNA (801bp) protein (267aa)
UPI0003D6677A related cluster n=1 Tax=unknown RepID=UPI0003D6677A rbh
Transcriptional regulator, MerR family {ECO:0000313|EMBL:KJZ84048.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
bltR; transcriptional regulator
NECEvent2014_3_5_scaffold_233_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30793..32520
DNA (1728bp) protein (576aa)
UPI0003D6893F related cluster n=1 Tax=unknown RepID=UPI0003D6893F rbh
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:KJZ84010.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
ABC transport system ATP-binding and permease protein
NECEvent2014_3_5_scaffold_233_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32525..34366
DNA (1842bp) protein (614aa)
UPI0003D5B655 related cluster n=1 Tax=unknown RepID=UPI0003D5B655 rbh
ABC transporter {ECO:0000313|EMBL:KHD14595.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ABC transport system ATP-binding and permease protein
NECEvent2014_3_5_scaffold_233_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34462..35355)
DNA (894bp) protein (298aa)
UPI0003D5D001 related cluster n=1 Tax=unknown RepID=UPI0003D5D001 rbh
Xylose operon regulatory protein {ECO:0000313|EMBL:KJZ84043.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.
hypothetical protein
NECEvent2014_3_5_scaffold_233_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35464..36183
DNA (720bp) protein (240aa)
UPI0003D5DD95 related cluster n=1 Tax=unknown RepID=UPI0003D5DD95 rbh
MFS transporter {ECO:0000313|EMBL:KHD14598.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
fucose permease
Displaying 25 items

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