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NECEvent2014_3_5_scaffold_315

Alias: 173_003_scaffold_315

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_315_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..143)
DNA (141bp) protein (47aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QTU2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53947.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
NECEvent2014_3_5_scaffold_315_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(278..811)
DNA (534bp) protein (178aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium butyricum RepID=M8JIM1_CLOBU rbh
Putative acetyltransferase, gnat family {ECO:0000313|EMBL:KJZ83179.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
GNAT family acetyltransferase
NECEvent2014_3_5_scaffold_315_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(998..2323)
DNA (1326bp) protein (442aa)
Amino acid permease n=2 Tax=Clostridium butyricum RepID=B1QTU4_CLOBU rbh
Amino acid permease family protein {ECO:0000313|EMBL:EEP54625.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4
amino acid permease
NECEvent2014_3_5_scaffold_315_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2615..3343)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AST0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP53704.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_3_5_scaffold_315_5
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3484..5844)
DNA (2361bp) protein (787aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridial
Endonuclease MutS2 n=3 Tax=Clostridium butyricum RepID=B1QTU6_CLOBU rbh
mutS3; MutS2 protein MutS
NECEvent2014_3_5_scaffold_315_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5904..8264)
DNA (2361bp) protein (787aa)
ydcP; protease YdcP (EC:3.4.-.-)
Peptidase, U32 family n=3 Tax=Clostridium butyricum RepID=B1QTU7_CLOBU rbh
Peptidase U32 {ECO:0000313|EMBL:EEP54277.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;
NECEvent2014_3_5_scaffold_315_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8401..10446)
DNA (2046bp) protein (682aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7G3_CLOBU rbh
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_315_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10783..12141
DNA (1359bp) protein (453aa)
murE1; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase MurE (EC:6.3.2.13)
Mur ligase family protein n=2 Tax=Clostridium butyricum RepID=B1QTU9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35805.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_5_scaffold_315_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12160..12885
DNA (726bp) protein (242aa)
Glutamine amidotransferase, CobB/CobQ family n=3 Tax=Clostridium butyricum RepID=B1QTV0_CLOBU rbh
CobB/CobQ domain protein glutamine amidotransferase {ECO:0000313|EMBL:EEP53398.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
putative glutamine amidotransferase
NECEvent2014_3_5_scaffold_315_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12932..13681)
DNA (750bp) protein (250aa)
Peptidoglycan N-acetylglucosamine deacetylase {ECO:0000313|EMBL:KJZ94361.1}; EC=3.5.1.- {ECO:0000313|EMBL:KJZ94361.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
Peptidoglycan N-acetylglucosamine deacetylase n=2 Tax=Clostridium butyricum RepID=B1QTV1_CLOBU rbh
xylanase/chitin deacetylase
NECEvent2014_3_5_scaffold_315_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13979..15262
DNA (1284bp) protein (428aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Clostridium butyricum RepID=M8JH65_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83124.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_5_scaffold_315_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15465..16073
DNA (609bp) protein (203aa)
Flavoredoxin n=4 Tax=Clostridium butyricum RepID=B1QTV3_CLOBU rbh
Flavoredoxin {ECO:0000313|EMBL:KJZ83127.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
flavin reductase domain protein FMN-binding protein
NECEvent2014_3_5_scaffold_315_13
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16106..17095
DNA (990bp) protein (330aa)
Putative acyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J868_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ94376.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
acyltransferase
NECEvent2014_3_5_scaffold_315_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17158..18000)
DNA (843bp) protein (281aa)
Transporter n=4 Tax=Clostridium butyricum RepID=B1QTV5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83174.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_5_scaffold_315_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18394..19245)
DNA (852bp) protein (284aa)
ABC-type nitrate/sulfonate/taurine/bicarbonate transport system, permease component n=3 Tax=Clostridium butyricum RepID=B1QTV6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83173.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ytlD; ABC transporter permease protein YtlD
NECEvent2014_3_5_scaffold_315_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19220..19996)
DNA (777bp) protein (259aa)
Taurine import ATP-binding protein TauB {ECO:0000313|EMBL:EEP52995.1}; EC=3.6.3.36 {ECO:0000313|EMBL:EEP52995.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
Taurine import ATP-binding protein TauB n=4 Tax=Clostridium butyricum RepID=B1QTV7_CLOBU rbh
ABC transporter related protein
NECEvent2014_3_5_scaffold_315_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20040..21056)
DNA (1017bp) protein (339aa)
ABC transporter substrate-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JIN1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97029.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
NECEvent2014_3_5_scaffold_315_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21250..23406)
DNA (2157bp) protein (719aa)
DNA topoisomerase III {ECO:0000313|EMBL:KJZ83159.1}; EC=5.99.1.2 {ECO:0000313|EMBL:KJZ83159.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
topB1; DNA topoisomerase 3 (EC:5.99.1.2)
DNA topoisomerase III n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7W5_CLOBU rbh
NECEvent2014_3_5_scaffold_315_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23513..24007)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASR9_CLOBU rbh
TspO {ECO:0000313|EMBL:KHD15001.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
TspO and MBR like protein
NECEvent2014_3_5_scaffold_315_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24112..26118)
DNA (2007bp) protein (669aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
resE2; sensor histidine kinase ResE (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHF8_CLOBU rbh
NECEvent2014_3_5_scaffold_315_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26111..27421)
DNA (1311bp) protein (437aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
yvrG1; sensor histidine kinase YvrG (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUU9_CLOBU rbh
Displaying 21 items

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