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NECEvent2014_3_5_scaffold_325

Alias: 173_003_scaffold_325

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_325_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..418)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JFI6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31821.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_325_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(518..1939)
DNA (1422bp) protein (474aa)
Integral membrane sensor signal transduction histidine kinase n=2 Tax=Clostridium butyricum RepID=M8JE81_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96446.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
integral membrane sensor signal transduction histidine kinase
NECEvent2014_3_5_scaffold_325_3
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1942..2658)
DNA (717bp) protein (239aa)
UPI0003D68AB7 related cluster n=1 Tax=unknown RepID=UPI0003D68AB7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88389.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
response regulator
NECEvent2014_3_5_scaffold_325_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2824..4770
DNA (1947bp) protein (649aa)
Molybdopterin oxidoreductase n=2 Tax=Clostridium butyricum RepID=M8K905_CLOBU rbh
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:KJZ86680.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
molybdopterin oxidoreductase Fe4S4 domain protein
NECEvent2014_3_5_scaffold_325_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4911..5600
DNA (690bp) protein (230aa)
Transcriptional regulatory protein ResD n=4 Tax=Clostridium butyricum RepID=B1R0U9_CLOBU rbh
Two-component response regulator {ECO:0000313|EMBL:KJZ86703.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.
transcriptional regulatory protein ResD
NECEvent2014_3_5_scaffold_325_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5597..7015
DNA (1419bp) protein (473aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JFI3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86688.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_5_scaffold_325_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7259..8845
DNA (1587bp) protein (529aa)
Alpha/beta superfamily hydrolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JE77_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86685.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
alpha/beta superfamily hydrolase
NECEvent2014_3_5_scaffold_325_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9063..10304
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A5U9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96465.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative voltage gated chloride channel family
NECEvent2014_3_5_scaffold_325_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10618..11547
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGC4_CLOBU rbh
Putative DNA polymerase III epsilon chain {ECO:0000313|EMBL:KJZ86696.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
DNA polymerase III epsilon subunit-like 3'-5' exonuclease
NECEvent2014_3_5_scaffold_325_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11801..12769)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YWN0_CLOBU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJZ86657.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_5_scaffold_325_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13044..14627
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YW68_CLOBU rbh
Exoenzymes regulatory protein AepA in lipid-linked oligosaccharide synthesis cluster {ECO:0000313|EMBL:KJZ86686.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
amidohydrolase
NECEvent2014_3_5_scaffold_325_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14892..19310
DNA (4419bp) protein (1473aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1523156 species="Bacteria; Firmicu
DNA polymerase III polC-type n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AI68_CLOBU rbh
polC; DNA polymerase III (alpha subunit)
NECEvent2014_3_5_scaffold_325_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19582..20058
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K0V0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86706.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_5_scaffold_325_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20169..21632
DNA (1464bp) protein (488aa)
UPI0003D6592D related cluster n=1 Tax=unknown RepID=UPI0003D6592D rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI88071.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_3_5_scaffold_325_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21702..22715)
DNA (1014bp) protein (338aa)
UPI0003D66853 related cluster n=1 Tax=unknown RepID=UPI0003D66853 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96444.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
metallophosphoesterase
NECEvent2014_3_5_scaffold_325_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23026..23970
DNA (945bp) protein (315aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1523156 species="Bacteria; Firmicutes;
Malate/lactate dehydrogenases (EC:1.1.1.27)
UPI00039DDD15 related cluster n=1 Tax=unknown RepID=UPI00039DDD15 rbh
NECEvent2014_3_5_scaffold_325_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24144..25652
DNA (1509bp) protein (503aa)
Xylulokinase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AI73_CLOBU rbh
Oxidoreductase of aldo/keto reductase family, subgroup 1 {ECO:0000313|EMBL:KJZ96453.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
xylulokinase
NECEvent2014_3_5_scaffold_325_18
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25745..26791
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A5V9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87104.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
ROK family protein
Displaying 18 items

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