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NECEvent2014_3_5_scaffold_331

Alias: 173_003_scaffold_331

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_331_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1744
DNA (1743bp) protein (581aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044573}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044602};; EC=3.
ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AC58_CLOBU
ATP-dependent nuclease subunit AddB
NECEvent2014_3_5_scaffold_331_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1796..5554
DNA (3759bp) protein (1253aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {E
addA; ATP-dependent helicase/nuclease subunit A (EC:3.1.-.- 3.6.4.12)
ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K166_CLOBU rbh
NECEvent2014_3_5_scaffold_331_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5660..6841)
DNA (1182bp) protein (394aa)
ErfK/YbiS/YcfS/YnhG family protein n=2 Tax=Clostridium butyricum RepID=B1QV27_CLOBU rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EEP52560.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4
putative L,D-transpeptidase
NECEvent2014_3_5_scaffold_331_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7049..7846
DNA (798bp) protein (266aa)
UPI00039A38E2 related cluster n=1 Tax=unknown RepID=UPI00039A38E2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91721.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_3_5_scaffold_331_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7984..9270)
DNA (1287bp) protein (429aa)
UPI0003D62B53 related cluster n=1 Tax=unknown RepID=UPI0003D62B53 rbh
Sodium:dicarboxylate symporter family protein {ECO:0000313|EMBL:ETI91798.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
sodium:dicarboxylate symporter family protein
NECEvent2014_3_5_scaffold_331_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9497..9598
DNA (102bp) protein (34aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI91797.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_3_5_scaffold_331_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9537..10421
DNA (885bp) protein (295aa)
Periplasmic sensor signal transduction histidine kinase n=3 Tax=Clostridium butyricum RepID=B1R229_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84665.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
histidine kinase
NECEvent2014_3_5_scaffold_331_trna_1
unknown

Not on your lists

10591..10662
DNA (72bp)
transferRNA
NECEvent2014_3_5_scaffold_331_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10832..11968
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K161_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29685.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_331_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12014..12907)
DNA (894bp) protein (298aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00093350};; TaxID=632245
psd1; phosphatidylserine decarboxylase proenzyme (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9A0_CLOBU rbh
NECEvent2014_3_5_scaffold_331_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13186..13758
DNA (573bp) protein (191aa)
Transcriptional regulator, TetR family n=4 Tax=Clostridium butyricum RepID=B1R218_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84703.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transcriptional regulator, TetR family
NECEvent2014_3_5_scaffold_331_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13918..15642
DNA (1725bp) protein (575aa)
iron hydrogenase 1 (EC:1.12.7.2)
Hydrogenase-1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JFU1_CLOBU rbh
Hydrogenase-1 {ECO:0000313|EMBL:EEP52487.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;
NECEvent2014_3_5_scaffold_331_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15856..16668
DNA (813bp) protein (271aa)
UPI0003D68E95 related cluster n=1 Tax=unknown RepID=UPI0003D68E95 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84695.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
HAD family hydrolase
NECEvent2014_3_5_scaffold_331_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16709..18298)
DNA (1590bp) protein (530aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8K157_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29680.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC transporter ATP-binding protein
NECEvent2014_3_5_scaffold_331_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18496..20196)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K996_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29679.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_331_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20199..20792)
DNA (594bp) protein (198aa)
UPI0003D5D045 related cluster n=1 Tax=unknown RepID=UPI0003D5D045 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97170.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_3_5_scaffold_331_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21015..21662
DNA (648bp) protein (216aa)
Hemolysin-3 n=4 Tax=Clostridium butyricum RepID=B1R212_CLOBU rbh
Hemolysin-3 {ECO:0000313|EMBL:EEP52515.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hemolysin III family channel protein
NECEvent2014_3_5_scaffold_331_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21726..23075)
DNA (1350bp) protein (450aa)
Membrane protein n=4 Tax=Clostridium butyricum RepID=B1R211_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29676.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
membrane protein
NECEvent2014_3_5_scaffold_331_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23326..24138
DNA (813bp) protein (271aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
proB; glutamate 5-kinase ProB (EC:2.7.2.11)
Glutamate 5-kinase n=4 Tax=Clostridium butyricum RepID=B1R210_CLOBU rbh
NECEvent2014_3_5_scaffold_331_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24244..25488
DNA (1245bp) protein (415aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:000
proA; gamma-glutamyl phosphate reductase ProA (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K992_CLOBU rbh
NECEvent2014_3_5_scaffold_331_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25703..26062
DNA (360bp) protein (120aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAA
mgsA; methylglyoxal synthase MgsA (EC:4.2.3.3)
Methylglyoxal synthase n=2 Tax=Clostridium butyricum RepID=B1R208_CLOBU
Displaying 21 items

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