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NECEvent2014_3_5_scaffold_374

Alias: 173_003_scaffold_374

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_374_1
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1012
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CYB6_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:ERI89565.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein rbh
NECEvent2014_3_5_scaffold_374_2
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1014..2111
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CGC8_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:ERI89564.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
NECEvent2014_3_5_scaffold_374_3
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2092..3048
DNA (957bp) protein (319aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CZP8_9FIRM rbh
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:ERI89563.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876
CoA-substrate-specific enzyme activase
NECEvent2014_3_5_scaffold_374_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3141..4706)
DNA (1566bp) protein (522aa)
Putative Rieske 2Fe-2S iron-sulfur protein yhfW {ECO:0000313|EMBL:CCQ97617.1}; EC=1.-.-.- {ECO:0000313|EMBL:CCQ97617.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
Putative Rieske 2Fe-2S iron-sulfur protein yhfW n=1 Tax=Clostridium ultunense Esp RepID=M1ZLQ6_9CLOT rbh
FAD dependent oxidoreductase
NECEvent2014_3_5_scaffold_374_5
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5519..6403
DNA (885bp) protein (295aa)
rRNA (adenine-N(6)-)-methyltransferase (EC:2.1.1.48)
rRNA (Adenine-N(6)-)-methyltransferase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKP8_ALKOO
rRNA (Adenine-N(6)-)-methyltransferase {ECO:0000313|EMBL:ABW20380.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremla
NECEvent2014_3_5_scaffold_374_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6706..7260)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00036B8021
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:ACA55928.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch
NECEvent2014_3_5_scaffold_374_7
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7442..8431)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002E83F64
ABC transporter {ECO:0000313|EMBL:KJF28838.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
iron chelate uptake ABC transporter solute-binding protein
NECEvent2014_3_5_scaffold_374_8
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8459..9214)
DNA (756bp) protein (252aa)
Iron ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. BL8 RepID=T0PKR7_9CLOT rbh
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:EQB88342.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. B
ABC transporter ATP-binding protein
NECEvent2014_3_5_scaffold_374_9
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9211..10161)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD107 RepID=J8JBG8_BACCE
Iron ABC transporter permease {ECO:0000313|EMBL:KJF28836.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
transport system permease protein
NECEvent2014_3_5_scaffold_374_10
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10161..11105)
DNA (945bp) protein (315aa)
Transport system permease protein n=2 Tax=Bacillus mycoides RepID=C3AGX9_BACMY
Iron ABC transporter permease {ECO:0000313|EMBL:KJF28835.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
fecCD transport family protein
NECEvent2014_3_5_scaffold_374_11
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11293..11655
DNA (363bp) protein (121aa)
AraC family transcriptional regulator n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI00036B83A3
hypothetical protein
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EHL06878.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobact
NECEvent2014_3_5_scaffold_374_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11839..13989)
DNA (2151bp) protein (717aa)
Ferrous iron transport protein B n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2G7_CLOBA rbh
Ferrous iron transport protein B {ECO:0000313|EMBL:AIY82115.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202
ferrous iron transport protein B
NECEvent2014_3_5_scaffold_374_13
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14006..14245)
DNA (240bp) protein (80aa)
Fe2+ transport system protein A n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LZK4_CLOCD
Uncharacterized protein {ECO:0000313|EMBL:KEZ86258.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
Fe2+ transport system protein A
NECEvent2014_3_5_scaffold_374_14
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14381..14863
DNA (483bp) protein (161aa)
Mn-dependent transcriptional regulator n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LTG3_CLOCD
Mn-dependent transcriptional regulator
Tax=BJP_IG2158_Thermincola_46_17
NECEvent2014_3_5_scaffold_374_15
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15022..15972
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PMB0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:KEZ84853.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
NECEvent2014_3_5_scaffold_374_16
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16502..16717)
DNA (216bp) protein (72aa)
Putative transcriptional regulator, XRE family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TPZ6_ALKMQ
XRE family transcriptional regulator
Putative transcriptional regulator, XRE family {ECO:0000313|EMBL:ABR48264.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilu
NECEvent2014_3_5_scaffold_374_17
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16720..17196)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SGS4_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:EDU38291.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;
hypothetical protein
NECEvent2014_3_5_scaffold_374_18
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17726..18142
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00031D2806
Uncharacterized protein {ECO:0000313|EMBL:EQB86796.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
lipB; lipoate-protein ligase B
NECEvent2014_3_5_scaffold_374_19
Viridibacillus arenosi, Viridibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18258..18737
DNA (480bp) protein (160aa)
DNA mismatch repair protein MutT n=1 Tax=Ornithinibacillus scapharcae RepID=UPI000225BA88
Ntp pyrophosphohydrolase {ECO:0000313|EMBL:ETT80969.1}; TaxID=1227360 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Viridibacillus.;" source="Viridibacillus arenosi FSL R5-213.;"
DNA mismatch repair protein MutT
NECEvent2014_3_5_scaffold_374_20
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18824..19291
DNA (468bp) protein (156aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ18592.1}; TaxID=1536774 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.;"
NECEvent2014_3_5_scaffold_374_21
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19342..20115
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Mesoplasma florum W37 RepID=U5PGY9_MESFO
Uncharacterized protein {ECO:0000313|EMBL:KIE47768.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.
hypothetical protein
NECEvent2014_3_5_scaffold_374_22
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20327..20677
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GN34_CLOLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK13658.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATC
NECEvent2014_3_5_scaffold_374_23
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20844..21320
DNA (477bp) protein (159aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
Superoxide dismutase [Cu-Zn] n=1 Tax=Clostridium ultunense Esp RepID=M1Z7N9_9CLOT
superoxide dismutase copper/zinc binding protein
NECEvent2014_3_5_scaffold_374_24
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21395..21757)
DNA (363bp) protein (121aa)
Peptidoglycan-binding lysin domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZC52_9CLOT
Peptidoglycan-binding lysin domain protein {ECO:0000313|EMBL:CCQ95398.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ult
peptidoglycan-binding LysM
Displaying 24 items

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