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NECEvent2014_3_5_scaffold_386

Alias: 173_003_scaffold_386

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_386_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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315..1055
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QYR8_CLOBU rbh
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_3_5_scaffold_386_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1068..1766
DNA (699bp) protein (233aa)
Alkaline phosphatase synthesis transcriptional regulatory proteinphoP n=2 Tax=Clostridium butyricum RepID=B1QYR7_CLOBU rbh
Two-component system response regulator {ECO:0000313|EMBL:ENZ35950.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
two component transcriptional regulator
NECEvent2014_3_5_scaffold_386_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1771..3459
DNA (1689bp) protein (563aa)
resE3; sensor histidine kinase ResE (EC:2.7.13.3)
Sensor histidine kinase n=2 Tax=Clostridium butyricum RepID=M8KCU7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83039.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_5_scaffold_386_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3965..4897
DNA (933bp) protein (311aa)
UPI00039D3904 related cluster n=1 Tax=unknown RepID=UPI00039D3904 rbh
Phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD16801.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
pstS; phosphate-binding protein PstS 1
NECEvent2014_3_5_scaffold_386_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5014..5904
DNA (891bp) protein (297aa)
Phosphate ABC transporter, permease protein PstC n=2 Tax=Clostridium butyricum RepID=M8JJC2_CLOBU rbh
Serine/threonine protein kinase PrkC, regulator of stationary phase {ECO:0000313|EMBL:KJZ84574.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
phosphate ABC transporter, inner membrane subunit PstC
NECEvent2014_3_5_scaffold_386_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5904..6788
DNA (885bp) protein (295aa)
Phosphate ABC transporter, permease protein PstA n=4 Tax=Clostridium butyricum RepID=B1QYR3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84573.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
yqgI; ABC transporter permease protein YqgI
NECEvent2014_3_5_scaffold_386_7
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6798..7547
DNA (750bp) protein (250aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
pstB1; phosphate import ATP-binding protein PstB (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8K4L2_CLOBU rbh
NECEvent2014_3_5_scaffold_386_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7569..8231
DNA (663bp) protein (221aa)
Phosphate-specific transport system accessory protein PhoU n=4 Tax=Clostridium butyricum RepID=B1QYR1_CLOBU rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
phosphate uptake regulator PhoU
NECEvent2014_3_5_scaffold_386_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8413..8598
DNA (186bp) protein (62aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=1523154 species="Bacteria; Firmic
Polyphosphate kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JJB7_CLOBU
NECEvent2014_3_5_scaffold_386_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8830..10170
DNA (1341bp) protein (447aa)
Fe-S oxidoreductase n=2 Tax=Clostridium butyricum RepID=M8JHZ1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ82979.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NifB/MoaA family Fe-S oxidoreductase
NECEvent2014_3_5_scaffold_386_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10170..11486
DNA (1317bp) protein (439aa)
GTPase Der n=4 Tax=Clostridium butyricum RepID=B1QYI8_CLOBU rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostri
der; GTPase Der
NECEvent2014_3_5_scaffold_386_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11491..12483
DNA (993bp) protein (331aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=4 Tax=Clostridium butyricum RepID=B1QYI7_CLOBU rbh
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
NECEvent2014_3_5_scaffold_386_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12726..14219
DNA (1494bp) protein (498aa)
UPI0003D5DC22 related cluster n=1 Tax=unknown RepID=UPI0003D5DC22 rbh
Polyferredoxin {ECO:0000313|EMBL:KJZ84578.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
spoIVA; stage IV sporulation protein A
NECEvent2014_3_5_scaffold_386_14
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14407..14844
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JJB2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83441.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
NECEvent2014_3_5_scaffold_386_15
unknown

Not on your lists

14987..15097
DNA (111bp) protein (37aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_386_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15072..16055
DNA (984bp) protein (328aa)
L-asparaginase {ECO:0000313|EMBL:EEP54406.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EEP54406.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
ansA; type II L-asparaginase (EC:3.5.1.1)
L-asparaginase n=2 Tax=Clostridium butyricum RepID=C4IJI5_CLOBU rbh
NECEvent2014_3_5_scaffold_386_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16470..17849
DNA (1380bp) protein (460aa)
Inner membrane protein YicO n=4 Tax=Clostridium butyricum RepID=C4IJI4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35964.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
permease family protein
NECEvent2014_3_5_scaffold_386_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18105..19007
DNA (903bp) protein (301aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R2X8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ82969.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_5_scaffold_386_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19023..19292
DNA (270bp) protein (90aa)
UPF0296 protein CBY_0536 n=4 Tax=Clostridium butyricum RepID=B1R2X7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD16786.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
NECEvent2014_3_5_scaffold_386_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19292..19930
DNA (639bp) protein (213aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
gmk; guanylate kinase Gmk (EC:2.7.4.8)
Guanylate kinase n=4 Tax=Clostridium butyricum RepID=B1R2X6_CLOBU rbh
NECEvent2014_3_5_scaffold_386_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19911..20132
DNA (222bp) protein (74aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=4 Tax=Clostridium butyricum RepID=B1R2X5_CLOBU
NECEvent2014_3_5_scaffold_386_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20134..20844
DNA (711bp) protein (237aa)
UPI0003D5E07F related cluster n=1 Tax=unknown RepID=UPI0003D5E07F
Uncharacterized protein {ECO:0000313|EMBL:KJZ82951.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Displaying 22 items

View Taxonomy