ggKbase home page

NECEvent2014_3_5_scaffold_447

Alias: 173_003_scaffold_447

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_447_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..84)
DNA (84bp) protein (28aa)
Spfh domain / band 7 family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDF7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84198.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_5_scaffold_447_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

365..898
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A6S3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32138.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
UBA/TS-N domain-containing protein
NECEvent2014_3_5_scaffold_447_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1038..1571
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJ38_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32137.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
UBA/TS-N domain-containing protein
NECEvent2014_3_5_scaffold_447_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1575..2255
DNA (681bp) protein (227aa)
Two-component system response regulator n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YWZ9_CLOBU rbh
Two-component system response regulator {ECO:0000313|EMBL:ENZ32136.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
DNA-binding response regulator
NECEvent2014_3_5_scaffold_447_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2248..3510
DNA (1263bp) protein (421aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXK0_CLOBU rbh
sensor histidine kinase
NECEvent2014_3_5_scaffold_447_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3663..3920
DNA (258bp) protein (86aa)
MerR-family transcriptional regulator n=4 Tax=Clostridium butyricum RepID=B1QUQ8_CLOBU
Transcriptional regulator {ECO:0000313|EMBL:EEP56112.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoN
transcriptional regulator
NECEvent2014_3_5_scaffold_447_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3997..4839)
DNA (843bp) protein (281aa)
Nitroreductase family protein n=2 Tax=Clostridium butyricum RepID=M8JET8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89599.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
nitroreductase family protein fused to ferredoxin domain
NECEvent2014_3_5_scaffold_447_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5211..6086
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJ33_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32132.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
bacterial regulatory helix-turn-helix , lysR family protein
NECEvent2014_3_5_scaffold_447_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6203..7138
DNA (936bp) protein (312aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
tRNA-dihydrouridine synthase (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K873_CLOBU rbh
NECEvent2014_3_5_scaffold_447_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7528..8679
DNA (1152bp) protein (384aa)
Multiple sugar-binding transport ATP-binding protein MsmK n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDG7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32130.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
NECEvent2014_3_5_scaffold_447_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8672..9535
DNA (864bp) protein (288aa)
Glycerol-3-phosphate ABC transporter n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEU3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89596.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
NECEvent2014_3_5_scaffold_447_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9535..10470
DNA (936bp) protein (312aa)
Sugar permease n=4 Tax=Clostridium butyricum RepID=B1QUQ2_CLOBU rbh
Sugar permease {ECO:0000313|EMBL:EEP56199.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
NECEvent2014_3_5_scaffold_447_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10530..11879
DNA (1350bp) protein (450aa)
sn-glycerol 3-phosphate ABC transporter substrate-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJ28_CLOBU rbh
sn-glycerol 3-phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ32127.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
NECEvent2014_3_5_scaffold_447_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12195..12350
DNA (156bp) protein (52aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum 60E.3 RepID=N9YWY9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32126.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_5_scaffold_447_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12544..12801
DNA (258bp) protein (86aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QUP9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84080.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
helix-turn-helix domain of resolvase
NECEvent2014_3_5_scaffold_447_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12901..13614)
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AH81_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84207.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
proton-coupled thiamine transporter YuaJ
NECEvent2014_3_5_scaffold_447_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13975..14214)
DNA (240bp) protein (80aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QUP7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ89602.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_3_5_scaffold_447_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14607..15386
DNA (780bp) protein (260aa)
Metal-dependent phosphohydrolase, HD subdomain n=4 Tax=Clostridium butyricum RepID=B1QUP6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32122.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_447_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15541..16395
DNA (855bp) protein (285aa)
HAD phosphatase superfamily protein n=2 Tax=Clostridium butyricum RepID=M8K064_CLOBU rbh
Cof-like hydrolase {ECO:0000313|EMBL:ENZ32121.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
cof family hydrolase
NECEvent2014_3_5_scaffold_447_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16435..17295
DNA (861bp) protein (287aa)
Phosphosugar-binding transcriptional regulator, RpiR family n=2 Tax=Clostridium butyricum RepID=M8JDH7_CLOBU rbh
Phosphosugar-binding transcriptional regulator, RpiR family {ECO:0000313|EMBL:KJZ84104.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
RpiR family transcriptional regulator
NECEvent2014_3_5_scaffold_447_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17842..18018
DNA (177bp) protein (59aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QUP3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84191.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_5_scaffold_447_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17963..19306
DNA (1344bp) protein (448aa)
UPI0003D5CBCD related cluster n=1 Tax=unknown RepID=UPI0003D5CBCD rbh
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
mgtE; magnesium transporter
NECEvent2014_3_5_scaffold_447_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19671..20621
DNA (951bp) protein (317aa)
Xylanase/chitin deacetylase, NodB family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEN0_CLOBU rbh
Xylanase/chitin deacetylase, NodB family {ECO:0000313|EMBL:EEP56396.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyri
xylanase/chitin deacetylase
Displaying 23 items

View Taxonomy