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NECEvent2014_3_5_scaffold_449

Alias: 173_003_scaffold_449

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_449_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1523)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXW5_CLOBU rbh
Polysaccharide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJZ84163.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
ABC-type sugar transport system, periplasmic component
NECEvent2014_3_5_scaffold_449_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1633..2520)
DNA (888bp) protein (296aa)
Protein LplC n=2 Tax=Clostridium butyricum RepID=M8K074_CLOBU rbh
Molybdenum transport ATP-binding protein ModC {ECO:0000313|EMBL:KJZ94102.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
carbohydrate ABC transporter membrane protein 2, CUT1 family
NECEvent2014_3_5_scaffold_449_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2545..3519)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJF8_CLOBU rbh
Polysaccharide ABC transporter permease {ECO:0000313|EMBL:KJZ84173.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
carbohydrate ABC transporter membrane protein 1, CUT1 family
NECEvent2014_3_5_scaffold_449_4
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3698..4381)
DNA (684bp) protein (228aa)
Putative membrane protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J4K2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ92147.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
NECEvent2014_3_5_scaffold_449_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4739..5881)
DNA (1143bp) protein (381aa)
XylR transcriptional regulator n=2 Tax=Clostridium butyricum RepID=B1R1M4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84171.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ROK family protein
NECEvent2014_3_5_scaffold_449_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6132..6860)
DNA (729bp) protein (243aa)
Dinitrogenase iron-molybdenum cofactor biosynthesis n=3 Tax=Clostridium butyricum RepID=B1R1M5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84181.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_5_scaffold_449_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7275..9350)
DNA (2076bp) protein (692aa)
Sensory box histidine kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JF41_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84155.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
two-component sensor kinase
NECEvent2014_3_5_scaffold_449_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9506..10447)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDS1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ94106.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
multimeric flavodoxin WrbA fused to cytochrome c-like domain protein
NECEvent2014_3_5_scaffold_449_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10746..12863
DNA (2118bp) protein (706aa)
Ribonucleotide reductase of class III (Anaerobic), large subunit {ECO:0000313|EMBL:KJZ84206.1}; EC=1.17.4.2 {ECO:0000313|EMBL:KJZ84206.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clo
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Clostridium butyricum RepID=M8K0G6_CLOBU rbh
NECEvent2014_3_5_scaffold_449_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12998..13495
DNA (498bp) protein (166aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridi
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Clostridium butyricum RepID=M8K8I7_CLOBU rbh
NECEvent2014_3_5_scaffold_449_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13571..14569)
DNA (999bp) protein (333aa)
UPI0003A5EF50 related cluster n=1 Tax=unknown RepID=UPI0003A5EF50 rbh
Ribose operon repressor {ECO:0000313|EMBL:KJZ92129.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
transcriptional regulator, LacI family
NECEvent2014_3_5_scaffold_449_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14745..16736)
DNA (1992bp) protein (664aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
tkt1; transketolase Tkt (EC:2.2.1.1)
Transketolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JF37_CLOBU rbh
NECEvent2014_3_5_scaffold_449_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16905..17309)
DNA (405bp) protein (135aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
Probable transaldolase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJG8_CLOBU
putative transaldolase
Displaying 13 items

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