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NECEvent2014_3_5_scaffold_459

Alias: 173_003_scaffold_459

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_459_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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58..1323
DNA (1266bp) protein (422aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTG8_CLOBU rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
NECEvent2014_3_5_scaffold_459_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1350..2141
DNA (792bp) protein (264aa)
yycJ; putative metallo-hydrolase YycJ (EC:3.-.-.-)
Beta-lactamase domain protein n=2 Tax=Clostridium butyricum RepID=M8K105_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30251.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_5_scaffold_459_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2199..2702
DNA (504bp) protein (168aa)
SEC-C domain protein n=4 Tax=Clostridium butyricum RepID=B1QTG6_CLOBU rbh
Protein export cytoplasm protein SecA ATPase RNA helicase {ECO:0000313|EMBL:KJZ85641.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
hypothetical protein
NECEvent2014_3_5_scaffold_459_4
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2910..3389
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methy
UPI0003D658AB related cluster n=2 Tax=unknown RepID=UPI0003D658AB rbh
rRNA large subunit methyltransferase
NECEvent2014_3_5_scaffold_459_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3499..4002
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABX2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30254.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_459_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4397..5020
DNA (624bp) protein (208aa)
TIGR00153 family protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YS73_CLOBU rbh
TIGR00153 family protein {ECO:0000313|EMBL:ENZ30255.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_459_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5013..6011
DNA (999bp) protein (333aa)
Phosphate transporter n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K111_CLOBU rbh
Putative low-affinity inorganic phosphate transporter {ECO:0000313|EMBL:KJZ85648.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
phosphate permease
NECEvent2014_3_5_scaffold_459_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6227..6565
DNA (339bp) protein (113aa)
Alkylphosphonate utilization operon protein PhnA n=4 Tax=Clostridium butyricum RepID=B1QTG0_CLOBU
Alkylphosphonate utilization protein {ECO:0000313|EMBL:KHD13392.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
phnA family protein
NECEvent2014_3_5_scaffold_459_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6637..6978
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JFP4_CLOBU
No significant {ECO:0000313|EMBL:KJZ85654.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_5_scaffold_459_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7245..7976
DNA (732bp) protein (244aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J5F2_CLOBU rbh
Transferase {ECO:0000313|EMBL:KHD13403.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hexapeptide repeat-containing transferase
NECEvent2014_3_5_scaffold_459_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8184..8366
DNA (183bp) protein (61aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTF7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30260.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_459_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8557..9516
DNA (960bp) protein (320aa)
Methyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K116_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30261.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
DNA methylase N-4/N-6 domain protein
NECEvent2014_3_5_scaffold_459_13
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9770..10093
DNA (324bp) protein (108aa)
phosphotransferase system cellobiose-specific component IIA (EC:2.7.1.69)
Lichenan-specific phosphotransferase enzyme iia component n=4 Tax=Clostridium butyricum RepID=B1QTF5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95304.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NECEvent2014_3_5_scaffold_459_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10160..10465
DNA (306bp) protein (102aa)
PTS system, cellobiose-specific IIB component {ECO:0000313|EMBL:KJZ85656.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ85656.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
celA5; cellobiose-specific phosphotransferase enzyme IIB component CelA (EC:2.7.1.69)
Lichenan-specific phosphotransferase enzyme iib component n=4 Tax=Clostridium butyricum RepID=B1QTF4_CLOBU
NECEvent2014_3_5_scaffold_459_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10638..11948
DNA (1311bp) protein (437aa)
Lichenan permease iic component n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J5F6_CLOBU rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
PTS system lactose/cellobiose family transporter subunit IIC
NECEvent2014_3_5_scaffold_459_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12126..12842
DNA (717bp) protein (239aa)
Transcriptional regulator n=4 Tax=Clostridium butyricum RepID=B1QTF2_CLOBU rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEP52403.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricu
GntR family transcriptional regulator
NECEvent2014_3_5_scaffold_459_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12865..12984
DNA (120bp) protein (40aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QTF1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85041.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_3_5_scaffold_459_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12981..14387
DNA (1407bp) protein (469aa)
Beta-glucosidase {ECO:0000313|EMBL:KJZ85645.1}; EC=3.2.1.21 {ECO:0000313|EMBL:KJZ85645.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
6-phospho-beta-galactosidase (Beta-d-phosphogalactosidegalactohydrolase) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEE3_CLOBU rbh
beta-galactosidase
NECEvent2014_3_5_scaffold_459_19
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14594..15514
DNA (921bp) protein (307aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1
pdxS; pyridoxal biosynthesis lyase PdxS (EC:4.-.-.-)
UPI0003D5CC07 related cluster n=1 Tax=unknown RepID=UPI0003D5CC07 rbh
NECEvent2014_3_5_scaffold_459_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15495..16118
DNA (624bp) protein (208aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase g
pdxT; glutamine amidotransferase subunit PdxT (EC:2.6.-.-)
UPI0003D5E257 related cluster n=1 Tax=unknown RepID=UPI0003D5E257 rbh
Displaying 20 items

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