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NECEvent2014_3_5_scaffold_492

Alias: 173_003_scaffold_492

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_492_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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147..1478
DNA (1332bp) protein (444aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
glnA1; glutamine synthetase GlnA (EC:6.3.1.2)
Glutamine synthetase n=3 Tax=Clostridium butyricum RepID=B1QYX5_CLOBU rbh
NECEvent2014_3_5_scaffold_492_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1517..2077
DNA (561bp) protein (187aa)
Nitrogen regulator n=4 Tax=Clostridium butyricum RepID=B1QYX6_CLOBU rbh
Ethanolamine two-component response regulator {ECO:0000313|EMBL:KJZ83276.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
nitR; nitrogen assimilation antiterminator protein NitR
NECEvent2014_3_5_scaffold_492_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2350..6930
DNA (4581bp) protein (1527aa)
Glutamate synthase, NADPH, large subunit {ECO:0000313|EMBL:EEP54279.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EEP54279.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
gltB1; ferredoxin-dependent glutamate synthase 1 (EC:1.4.7.1)
Glutamate synthase [NADPH] large chain n=2 Tax=Clostridium butyricum RepID=B1QYX7_CLOBU rbh
NECEvent2014_3_5_scaffold_492_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6945..8417
DNA (1473bp) protein (491aa)
Glutamate synthase NADPH small chain {ECO:0000313|EMBL:KJZ83303.1}; EC=1.4.1.13 {ECO:0000313|EMBL:KJZ83303.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Glutamate synthase, NADH/NADPH, small subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7U5_CLOBU rbh
glutamate synthase, NADH/NADPH, small subunit
NECEvent2014_3_5_scaffold_492_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8530..9942)
DNA (1413bp) protein (471aa)
mannan endo-1,4-beta-mannosidase (Beta-mannanase) (1,4-beta-D-mannan mannanohydrolase) (EC:3.2.1.78)
Mannan endo-1,4-beta-mannosidase (Beta-mannanase) (1,4-beta-D-mannan mannanohydrolase) n=2 Tax=Clostridium butyricum RepID=C4IH24_CLOBU rbh
Beta-1,4-mannanase {ECO:0000313|EMBL:KJZ83188.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_5_scaffold_492_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10456..10743
DNA (288bp) protein (96aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QVT6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83274.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_5_scaffold_492_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10905..11783
DNA (879bp) protein (293aa)
Transcriptional regulator, LysR family n=2 Tax=Clostridium butyricum RepID=M8KBY7_CLOBU rbh
Transcriptional regulator, MerR family {ECO:0000313|EMBL:KJZ83238.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
LysR family transcriptional regulator
NECEvent2014_3_5_scaffold_492_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12070..13077
DNA (1008bp) protein (336aa)
Membrane protein n=2 Tax=Clostridium butyricum RepID=M8J819_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35769.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
membrane protein
NECEvent2014_3_5_scaffold_492_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13230..14438
DNA (1209bp) protein (403aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7U9_CLOBU rbh
NECEvent2014_3_5_scaffold_492_trna_1
unknown

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14662..14733
DNA (72bp)
transferRNA
Displaying 10 items

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