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NECEvent2014_3_5_scaffold_993

Alias: 173_003_scaffold_993

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_993_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..782)
DNA (780bp) protein (260aa)
Zinc/iron permease n=2 Tax=Clostridium butyricum RepID=M8JLN1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88954.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
zupT; zinc transporter ZupT
NECEvent2014_3_5_scaffold_993_trna_1
unknown

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1220..1291
DNA (72bp)
transferRNA
NECEvent2014_3_5_scaffold_993_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1587..2108)
DNA (522bp) protein (174aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Signal peptidase I n=4 Tax=Clostridium butyricum RepID=B1QZH3_CLOBU rbh
signal peptidase I
NECEvent2014_3_5_scaffold_993_3
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2127..2573)
DNA (447bp) protein (149aa)
Putative membrane protein n=2 Tax=Clostridium butyricum RepID=B1QZH4_CLOBU rbh
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase {ECO:0000313|EMBL:KJZ90178.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiale
membrane protein
NECEvent2014_3_5_scaffold_993_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2570..2773)
DNA (204bp) protein (68aa)
HTH DNA-binding protein n=2 Tax=Clostridium butyricum RepID=B1QZH5_CLOBU
Conserved domain protein {ECO:0000313|EMBL:EEP54507.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
Predicted transcriptional regulators
NECEvent2014_3_5_scaffold_993_5
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3100..3627
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMX2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ90168.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
NECEvent2014_3_5_scaffold_993_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3803..3943
DNA (141bp) protein (47aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JLM6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33589.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_993_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4048..4443)
DNA (396bp) protein (132aa)
Conserved protein n=4 Tax=Clostridium butyricum RepID=B1QZH8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33590.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying 8 items

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