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NECEvent2014_3_5_scaffold_165_13

Organism: NECEvent2014_3_5_Clostridium_butyricum_29_29

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 2
Location: 12543..13694

Top 3 Functional Annotations

Value Algorithm Source
ispH1; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH (EC:1.17.1.2) similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 384.0
  • Bit_score: 608
  • Evalue 1.40e-171
Ribosomal protein S1 n=2 Tax=Clostridium butyricum RepID=C4IE80_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 383.0
  • Bit_score: 732
  • Evalue 3.10e-208
  • rbh
SSU ribosomal protein S1p {ECO:0000313|EMBL:KJZ91444.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 383.0
  • Bit_score: 733
  • Evalue 1.10e-208

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Taxonomy

Clostridium sp. IBUN22A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1152
ATGGCAAATGAAGAAATATTAAACAGCATGGATGAACTGTTAAAAGATTATGATGTAAAAAAACTTAACAGAGGAGATATTTTAAAAGGAACTGTTATAGATGTAAATGATAAAGAAGTTTCTGTAAATATAAATTATGCTTTTGATGGATTAATATCAAAAGAAGAAGTTTCAAGTGATGAAAAAGATCCAAGAGATGTTGTGGCAATTGGAGATGAAATTGAAGTGTATGTTATATCGCCTAATGATGGGGATGGGTACGTTGAATTGTCATTAAAAAGATCAAAACAGATAAAGGAAAAAGAAAATATAAAAGATGCATTTAAAAATGGAAATATTGTATCTGTAAAAATTAAAGAAGAAATTAAGGGTGGATTAGCTGCATATTATGGAAACTTAAGGGTGTTTATTCCAGGCTCTCTTGCAAGTAGAGAAAGAATTGAATTAAGTACTCTTGTAGGTAAAGAAATAGATGTTAAAATAACTGAATTAGATCTAAATAATAATAAAATTGTAGCATCTAGAAGAGTTATTGAAGAAGAAGAATATAACAAAAATAAAAAAGTAATATGGAACAGCTTACAAGAAGGTGAAAAGAGAACTGGAGTTGTTAAAAAGCTTGTTAAATTTGGAGCATTTGTAGATATCGGAGGAGTAGAAGGTTTAATTCATCTTTCGGATTTATCATGGGAAAGAGTAAATAAGCCAGAAGAGATCGTTAAAGAAGGGGATAAAGTTGAAGTATTTATTGGTAGTGTAGATAAGGAAAAGGAAAGACTATCTTTAATATTAAAGGATATTGCTAAAGAACCTTGGTCTGTTCATAGTGGAGAAATAAATGAAGGTGATGTTATAGAAGGAAAAGTTGTAAGACTTACTTCTTTTGGTGCCTTTGTAGAATTATTTGATGGTGTCGAAGGGCTTGTACACATAACTGAAATAACTGATGAAAATATTGCAAAACCTTCTGATGTTTTACAATTAAATCAAAAGGTAAAAGTTAAAGTGTTAAGTATAGATAGGGAAAATAAGAAAATGTCTTTAAGTATAAAAGATGCTGTTGAAAGTAGTAAGGAATATCTTGAATATGTAGATAATGAAGAAGAGGGAACTTCTTTGGCAGATTTACTTAAAGGATTCAAATTTAATTAG
PROTEIN sequence
Length: 384
MANEEILNSMDELLKDYDVKKLNRGDILKGTVIDVNDKEVSVNINYAFDGLISKEEVSSDEKDPRDVVAIGDEIEVYVISPNDGDGYVELSLKRSKQIKEKENIKDAFKNGNIVSVKIKEEIKGGLAAYYGNLRVFIPGSLASRERIELSTLVGKEIDVKITELDLNNNKIVASRRVIEEEEYNKNKKVIWNSLQEGEKRTGVVKKLVKFGAFVDIGGVEGLIHLSDLSWERVNKPEEIVKEGDKVEVFIGSVDKEKERLSLILKDIAKEPWSVHSGEINEGDVIEGKVVRLTSFGAFVELFDGVEGLVHITEITDENIAKPSDVLQLNQKVKVKVLSIDRENKKMSLSIKDAVESSKEYLEYVDNEEEGTSLADLLKGFKFN*