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NECEvent2014_3_5_scaffold_165

Alias: 173_003_scaffold_165

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_165_1
unknown

Not on your lists

comp(1..69)
DNA (69bp) protein (23aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_165_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62..1129)
DNA (1068bp) protein (356aa)
2-nitropropane dioxygenase, NPD n=2 Tax=Clostridium butyricum RepID=M8KBD8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31180.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
2-nitropropane dioxygenase, NPD
NECEvent2014_3_5_scaffold_165_trna_1
unknown

Not on your lists

1426..1497
DNA (72bp)
transferRNA
NECEvent2014_3_5_scaffold_165_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1827..2765
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEI6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31179.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_165_4
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2875..3057
DNA (183bp) protein (61aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1R176_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94937.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
ssp; small, acid-soluble spore protein 1
NECEvent2014_3_5_scaffold_165_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3178..3675)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGD5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31177.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PAP2 superfamily protein
NECEvent2014_3_5_scaffold_165_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3901..5922
DNA (2022bp) protein (674aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUC5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31176.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_165_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6025..6924
DNA (900bp) protein (300aa)
ABC transporter, substrate-binding protein n=4 Tax=Clostridium butyricum RepID=B1R179_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84428.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
periplasmic solute binding protein
NECEvent2014_3_5_scaffold_165_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6985..7968)
DNA (984bp) protein (328aa)
PAS domain S-box protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEI0_CLOBU rbh
PAS domain S-box protein {ECO:0000313|EMBL:ENZ31174.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
diguanylate cyclase/phosphodiesterase
NECEvent2014_3_5_scaffold_165_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8179..8835
DNA (657bp) protein (219aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=R0A3Z0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31173.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_5_scaffold_165_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8992..10812
DNA (1821bp) protein (607aa)
DNA mismatch repair protein MutS domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGF2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31172.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
mutS1; DNA mismatch repair protein MutS
NECEvent2014_3_5_scaffold_165_11

Not on your lists

10825..11763
DNA (939bp) protein (313aa)
Exonuclease, RNase T and DNA polymerase III n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K351_CLOBU rbh
Exonuclease family protein {ECO:0000313|EMBL:ETJ16709.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
exonuclease
NECEvent2014_3_5_scaffold_165_12
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11885..12334
DNA (450bp) protein (150aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:KJZ91454.1}; EC=1.1.1.205 {ECO:0000313|EMBL:KJZ91454.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
CBS domain protein n=4 Tax=Clostridium butyricum RepID=B1R184_CLOBU rbh
CBS-domain-containing membrane protein
NECEvent2014_3_5_scaffold_165_13
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12543..13694
DNA (1152bp) protein (384aa)
ispH1; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH (EC:1.17.1.2)
Ribosomal protein S1 n=2 Tax=Clostridium butyricum RepID=C4IE80_CLOBU rbh
SSU ribosomal protein S1p {ECO:0000313|EMBL:KJZ91444.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NECEvent2014_3_5_scaffold_165_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13769..15187)
DNA (1419bp) protein (473aa)
Pyruvate kinase {ECO:0000313|EMBL:KHD14498.1}; EC=2.7.1.40 {ECO:0000313|EMBL:KHD14498.1};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
pykF; pyruvate kinase PykF (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3Y4_CLOBU rbh
NECEvent2014_3_5_scaffold_165_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15369..16826
DNA (1458bp) protein (486aa)
pepD; cytosol non-specific dipeptidase PepD (EC:3.4.13.18)
Xaa-His dipeptidase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGC1_CLOBU rbh
Xaa-His dipeptidase {ECO:0000313|EMBL:ENZ31167.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_5_scaffold_165_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17214..17798
DNA (585bp) protein (195aa)
SagA protein n=3 Tax=Clostridium butyricum RepID=B1R188_CLOBU rbh
NLP/P60 protein {ECO:0000313|EMBL:EEP55272.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262
NLP/P60 protein
NECEvent2014_3_5_scaffold_165_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18171..18695
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KBB8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84456.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_5_scaffold_165_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18939..19505
DNA (567bp) protein (189aa)
Maf-like protein maf n=3 Tax=Clostridium butyricum RepID=B1R190_CLOBU rbh
Maf-like protein ClosIBUN125C_CONTIG61g03346 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
Maf-like protein
NECEvent2014_3_5_scaffold_165_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19551..20240
DNA (690bp) protein (230aa)
DNA repair protein RadC n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHW1_CLOBU rbh
DNA repair protein RadC {ECO:0000313|EMBL:KJZ84473.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
radC; DNA replication and repair protein RadC
NECEvent2014_3_5_scaffold_165_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20264..21283
DNA (1020bp) protein (340aa)
Rod shape-determining protein MreB n=4 Tax=Clostridium butyricum RepID=B1R192_CLOBU rbh
MreB/Mrl family cell shape determining protein {ECO:0000313|EMBL:ENZ31162.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
mreB; Rod shape-determining protein MreB
NECEvent2014_3_5_scaffold_165_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21291..22139
DNA (849bp) protein (283aa)
Cell shape-determining protein MreC n=4 Tax=Clostridium butyricum RepID=B1R193_CLOBU rbh
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
rod shape-determining protein MreC
NECEvent2014_3_5_scaffold_165_22
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22152..22646
DNA (495bp) protein (165aa)
Rod shape-determining protein MreD n=2 Tax=Clostridium butyricum RepID=M8KBB1_CLOBU rbh
Sugar/maltose fermentation stimulation protein {ECO:0000313|EMBL:KJZ96906.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
mreD; rod shape-determining protein, subunit D
NECEvent2014_3_5_scaffold_165_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22640..25636
DNA (2997bp) protein (999aa)
Penicillin-binding Protein dimerisation domain family n=2 Tax=Clostridium butyricum RepID=B1R195_CLOBU rbh
Penicillin-binding protein, transpeptidase {ECO:0000313|EMBL:EEP55323.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium buty
penicillin-binding Protein dimerisation domain family
NECEvent2014_3_5_scaffold_165_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26024..26707
DNA (684bp) protein (228aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHV3_CLOBU rbh
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
sugar fermentation stimulation protein A
NECEvent2014_3_5_scaffold_165_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26917..27576
DNA (660bp) protein (220aa)
Probable septum site-determining protein MinC n=4 Tax=Clostridium butyricum RepID=B1R197_CLOBU rbh
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
minC; septum formation inhibitor
NECEvent2014_3_5_scaffold_165_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27598..28398
DNA (801bp) protein (267aa)
Site-determining protein n=4 Tax=Clostridium butyricum RepID=B1R198_CLOBU rbh
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
minD; septum site-determining protein MinD
NECEvent2014_3_5_scaffold_165_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28413..28679
DNA (267bp) protein (89aa)
Cell division topological specificity factor n=4 Tax=Clostridium butyricum RepID=B1R199_CLOBU
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
cell division topological specificity factor MinE
NECEvent2014_3_5_scaffold_165_28
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29077..30207
DNA (1131bp) protein (377aa)
Rod shape-determining protein RodA n=3 Tax=Clostridium butyricum RepID=B1R1A0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96871.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
stage V sporulation protein E
NECEvent2014_3_5_scaffold_165_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30338..30817
DNA (480bp) protein (160aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R1A1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD14484.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
Displaying items 1-30 of 49 in total

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